Gene : Glyma.10G041200 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR33271:SF3 - CUPIN DOMAIN-CONTAINING PROTEIN Genomic Order:  412
Name:  ? Glyma.10G041200 Secondary Identifier:  ? PAC:30477680
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G041200 0.5kb upstream 0.5kb upstream 1455 true Chr10: 3613443-3614897 Glycine max
Glyma.10G041200 0.5kb upstream 0.5kb upstream 500 false Chr10: 3613443-3613942 Glycine max
Glyma.10G041200 0.5kb downstream 0.5kb downstream 1455 true Chr10: 3613943-3615397 Glycine max
Glyma.10G041200 0.5kb downstream 0.5kb downstream 500 false Chr10: 3614898-3615397 Glycine max
Glyma.10G041200 1.0kb upstream 1.0kb upstream 1955 true Chr10: 3612943-3614897 Glycine max
Glyma.10G041200 1.0kb upstream 1.0kb upstream 1000 false Chr10: 3612943-3613942 Glycine max
Glyma.10G041200 1.0kb downstream 1.0kb downstream 1955 true Chr10: 3613943-3615897 Glycine max
Glyma.10G041200 1.0kb downstream 1.0kb downstream 1000 false Chr10: 3614898-3615897 Glycine max
Glyma.10G041200 2.0kb upstream 2.0kb upstream 2955 true Chr10: 3611943-3614897 Glycine max
Glyma.10G041200 2.0kb upstream 2.0kb upstream 2000 false Chr10: 3611943-3613942 Glycine max
Glyma.10G041200 2.0kb downstream 2.0kb downstream 2955 true Chr10: 3613943-3616897 Glycine max
Glyma.10G041200 2.0kb downstream 2.0kb downstream 2000 false Chr10: 3614898-3616897 Glycine max
Glyma.10G041200 5.0kb upstream 5.0kb upstream 5955 true Chr10: 3608943-3614897 Glycine max
Glyma.10G041200 5.0kb upstream 5.0kb upstream 5000 false Chr10: 3608943-3613942 Glycine max
Glyma.10G041200 5.0kb downstream 5.0kb downstream 5955 true Chr10: 3613943-3619897 Glycine max
Glyma.10G041200 5.0kb downstream 5.0kb downstream 5000 false Chr10: 3614898-3619897 Glycine max
Glyma.10G041200 10.0kb upstream 10.0kb upstream 10955 true Chr10: 3603943-3614897 Glycine max
Glyma.10G041200 10.0kb upstream 10.0kb upstream 10000 false Chr10: 3603943-3613942 Glycine max
Glyma.10G041200 10.0kb downstream 10.0kb downstream 10955 true Chr10: 3613943-3624897 Glycine max
Glyma.10G041200 10.0kb downstream 10.0kb downstream 10000 false Chr10: 3614898-3624897 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315039 5265 Fabidae View MSA
124060878 5270 Rosid View MSA
123742997 5271 Pentapetalae View MSA
122793157 5272 Eudicot View MSA
122044635 5273 Angiosperm View MSA
121350768 5274 Embryophyte View MSA
123425697 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.24697 0.0 4.64979    
cufflinks 0.138368 0.0 0.56451 Low Low
cufflinks 16.9767 0.0 48.1794   High
cufflinks 0.6223 0.0 2.39096    
cufflinks 3.53947 0.0 12.3399    
cufflinks 7.98983 0.0 25.1961    
cufflinks 0.319128 0.0 1.26017    
cufflinks 0.72895 0.0 2.77884    
cufflinks 12.4561 0.0 36.7385   High
cufflinks 0.486        
cufflinks 5.795     High  
cufflinks 10.743     High High
cufflinks 7.274     High  
cufflinks 3.09        
cufflinks 5.344     High  
cufflinks 0.268       Low
cufflinks 12.236     High High
cufflinks 1.287        
cufflinks 0.401        
cufflinks 0.264       Low
cufflinks 4.098        
cufflinks 0.269       Low
cufflinks 0.169       Low
cufflinks 3.248        
cufflinks 0.534        
cufflinks 7.467     High High

0 Strain