Gene : Glyma.10G041900 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR10168:SF14 - GLUTAREDOXIN-C5, CHLOROPLASTIC-RELATED Genomic Order:  419
Name:  ? Glyma.10G041900 Secondary Identifier:  ? PAC:30474516
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax THIOREDOX-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G041900 0.5kb upstream 0.5kb upstream 3136 true Chr10: 3746533-3749668 Glycine max
Glyma.10G041900 0.5kb upstream 0.5kb upstream 500 false Chr10: 3746533-3747032 Glycine max
Glyma.10G041900 0.5kb downstream 0.5kb downstream 3136 true Chr10: 3747033-3750168 Glycine max
Glyma.10G041900 0.5kb downstream 0.5kb downstream 500 false Chr10: 3749669-3750168 Glycine max
Glyma.10G041900 1.0kb upstream 1.0kb upstream 3636 true Chr10: 3746033-3749668 Glycine max
Glyma.10G041900 1.0kb upstream 1.0kb upstream 1000 false Chr10: 3746033-3747032 Glycine max
Glyma.10G041900 1.0kb downstream 1.0kb downstream 3636 true Chr10: 3747033-3750668 Glycine max
Glyma.10G041900 1.0kb downstream 1.0kb downstream 1000 false Chr10: 3749669-3750668 Glycine max
Glyma.10G041900 2.0kb upstream 2.0kb upstream 4636 true Chr10: 3745033-3749668 Glycine max
Glyma.10G041900 2.0kb upstream 2.0kb upstream 2000 false Chr10: 3745033-3747032 Glycine max
Glyma.10G041900 2.0kb downstream 2.0kb downstream 4636 true Chr10: 3747033-3751668 Glycine max
Glyma.10G041900 2.0kb downstream 2.0kb downstream 2000 false Chr10: 3749669-3751668 Glycine max
Glyma.10G041900 5.0kb upstream 5.0kb upstream 7636 true Chr10: 3742033-3749668 Glycine max
Glyma.10G041900 5.0kb upstream 5.0kb upstream 5000 false Chr10: 3742033-3747032 Glycine max
Glyma.10G041900 5.0kb downstream 5.0kb downstream 7636 true Chr10: 3747033-3754668 Glycine max
Glyma.10G041900 5.0kb downstream 5.0kb downstream 5000 false Chr10: 3749669-3754668 Glycine max
Glyma.10G041900 10.0kb upstream 10.0kb upstream 12636 true Chr10: 3737033-3749668 Glycine max
Glyma.10G041900 10.0kb upstream 10.0kb upstream 10000 false Chr10: 3737033-3747032 Glycine max
Glyma.10G041900 10.0kb downstream 10.0kb downstream 12636 true Chr10: 3747033-3759668 Glycine max
Glyma.10G041900 10.0kb downstream 10.0kb downstream 10000 false Chr10: 3749669-3759668 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026565 5273 Angiosperm View MSA
122308428 5265 Fabidae View MSA
124066843 5270 Rosid View MSA
123737863 5271 Pentapetalae View MSA
122787960 5272 Eudicot View MSA
121350843 5274 Embryophyte View MSA
123428660 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 42.7309 0.0 147.312 High High
cufflinks 33.9037 0.0 101.22 High  
cufflinks 14.8241 0.0 56.9424   Low
cufflinks 23.4326 0.0 84.4306 High  
cufflinks 30.0047 0.0 103.863 High  
cufflinks 28.9502 0.0 99.9049 High  
cufflinks 25.4685 0.0 88.5958 High  
cufflinks 27.6674 0.0 96.3182 High  
cufflinks 26.8423 0.0 94.0041 High  
cufflinks 5.96        
cufflinks 0.651       Low
cufflinks 3.475        
cufflinks 5.385        
cufflinks 6.564        
cufflinks 1.467        
cufflinks 8.119     High  
cufflinks 1.401        
cufflinks 4.343        
cufflinks 5.639        
cufflinks 6.995     High  
cufflinks 0.951       Low
cufflinks 7.509     High  
cufflinks 8.663     High High
cufflinks 0.901       Low
cufflinks 8.176     High  
cufflinks 1.598        

0 Strain