Gene : Glyma.10G043400 G. max Wm82.a2.v1
Defline:  (1 of 3) PF09133 - SANTA (SANT Associated) (SANTA) Genomic Order:  434
Name:  ? Glyma.10G043400 Secondary Identifier:  ? PAC:30476091
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G043400 0.5kb upstream 0.5kb upstream 8015 true Chr10: 3908253-3916267 Glycine max
Glyma.10G043400 0.5kb upstream 0.5kb upstream 500 false Chr10: 3908253-3908752 Glycine max
Glyma.10G043400 0.5kb downstream 0.5kb downstream 8015 true Chr10: 3908753-3916767 Glycine max
Glyma.10G043400 0.5kb downstream 0.5kb downstream 500 false Chr10: 3916268-3916767 Glycine max
Glyma.10G043400 1.0kb upstream 1.0kb upstream 8515 true Chr10: 3907753-3916267 Glycine max
Glyma.10G043400 1.0kb upstream 1.0kb upstream 1000 false Chr10: 3907753-3908752 Glycine max
Glyma.10G043400 1.0kb downstream 1.0kb downstream 8515 true Chr10: 3908753-3917267 Glycine max
Glyma.10G043400 1.0kb downstream 1.0kb downstream 1000 false Chr10: 3916268-3917267 Glycine max
Glyma.10G043400 2.0kb upstream 2.0kb upstream 9515 true Chr10: 3906753-3916267 Glycine max
Glyma.10G043400 2.0kb upstream 2.0kb upstream 2000 false Chr10: 3906753-3908752 Glycine max
Glyma.10G043400 2.0kb downstream 2.0kb downstream 9515 true Chr10: 3908753-3918267 Glycine max
Glyma.10G043400 2.0kb downstream 2.0kb downstream 2000 false Chr10: 3916268-3918267 Glycine max
Glyma.10G043400 5.0kb upstream 5.0kb upstream 12515 true Chr10: 3903753-3916267 Glycine max
Glyma.10G043400 5.0kb upstream 5.0kb upstream 5000 false Chr10: 3903753-3908752 Glycine max
Glyma.10G043400 5.0kb downstream 5.0kb downstream 12515 true Chr10: 3908753-3921267 Glycine max
Glyma.10G043400 5.0kb downstream 5.0kb downstream 5000 false Chr10: 3916268-3921267 Glycine max
Glyma.10G043400 10.0kb upstream 10.0kb upstream 17515 true Chr10: 3898753-3916267 Glycine max
Glyma.10G043400 10.0kb upstream 10.0kb upstream 10000 false Chr10: 3898753-3908752 Glycine max
Glyma.10G043400 10.0kb downstream 10.0kb downstream 17515 true Chr10: 3908753-3926267 Glycine max
Glyma.10G043400 10.0kb downstream 10.0kb downstream 10000 false Chr10: 3916268-3926267 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310431 5265 Fabidae View MSA
124066447 5270 Rosid View MSA
123750067 5271 Pentapetalae View MSA
122795958 5272 Eudicot View MSA
122043476 5273 Angiosperm View MSA
121351771 5274 Embryophyte View MSA
123382314 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.50287 0.0 13.0476    
cufflinks 4.40017 0.0 17.1496   High
cufflinks 0.937947 0.0 5.15168   Low
cufflinks 2.12602 0.0 11.4303    
cufflinks 3.01799 0.0 14.4792    
cufflinks 2.44784 0.0 10.8554    
cufflinks 2.26487 0.0 9.71845    
cufflinks 2.03086 0.0 11.3255    
cufflinks 2.15786 0.0 10.7874    
cufflinks 0.2        
cufflinks 0.072       Low
cufflinks 0.187        
cufflinks 0.32        
cufflinks 0.38       High
cufflinks 0.086       Low
cufflinks 0.284        
cufflinks 0.065     Low Low
cufflinks 0.18        
cufflinks 0.56       High
cufflinks 0.182        
cufflinks 0.17        
cufflinks 0.265        
cufflinks 0.396       High
cufflinks 0.104        
cufflinks 0.207        
cufflinks 0.125        

0 Strain