Gene : Glyma.10G035800 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR13038 - APG9 AUTOPHAGY 9 Genomic Order:  358
Name:  ? Glyma.10G035800 Secondary Identifier:  ? PAC:30475544
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G035800 0.5kb upstream 0.5kb upstream 7572 true Chr10: 3130466-3138037 Glycine max
Glyma.10G035800 0.5kb upstream 0.5kb upstream 500 false Chr10: 3130466-3130965 Glycine max
Glyma.10G035800 0.5kb downstream 0.5kb downstream 7572 true Chr10: 3130966-3138537 Glycine max
Glyma.10G035800 0.5kb downstream 0.5kb downstream 500 false Chr10: 3138038-3138537 Glycine max
Glyma.10G035800 1.0kb upstream 1.0kb upstream 8072 true Chr10: 3129966-3138037 Glycine max
Glyma.10G035800 1.0kb upstream 1.0kb upstream 1000 false Chr10: 3129966-3130965 Glycine max
Glyma.10G035800 1.0kb downstream 1.0kb downstream 8072 true Chr10: 3130966-3139037 Glycine max
Glyma.10G035800 1.0kb downstream 1.0kb downstream 1000 false Chr10: 3138038-3139037 Glycine max
Glyma.10G035800 2.0kb upstream 2.0kb upstream 9072 true Chr10: 3128966-3138037 Glycine max
Glyma.10G035800 2.0kb upstream 2.0kb upstream 2000 false Chr10: 3128966-3130965 Glycine max
Glyma.10G035800 2.0kb downstream 2.0kb downstream 9072 true Chr10: 3130966-3140037 Glycine max
Glyma.10G035800 2.0kb downstream 2.0kb downstream 2000 false Chr10: 3138038-3140037 Glycine max
Glyma.10G035800 5.0kb upstream 5.0kb upstream 12072 true Chr10: 3125966-3138037 Glycine max
Glyma.10G035800 5.0kb upstream 5.0kb upstream 5000 false Chr10: 3125966-3130965 Glycine max
Glyma.10G035800 5.0kb downstream 5.0kb downstream 12072 true Chr10: 3130966-3143037 Glycine max
Glyma.10G035800 5.0kb downstream 5.0kb downstream 5000 false Chr10: 3138038-3143037 Glycine max
Glyma.10G035800 10.0kb upstream 10.0kb upstream 17072 true Chr10: 3120966-3138037 Glycine max
Glyma.10G035800 10.0kb upstream 10.0kb upstream 10000 false Chr10: 3120966-3130965 Glycine max
Glyma.10G035800 10.0kb downstream 10.0kb downstream 17072 true Chr10: 3130966-3148037 Glycine max
Glyma.10G035800 10.0kb downstream 10.0kb downstream 10000 false Chr10: 3138038-3148037 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309851 5265 Fabidae View MSA
124064260 5270 Rosid View MSA
123743706 5271 Pentapetalae View MSA
122786972 5272 Eudicot View MSA
122044754 5273 Angiosperm View MSA
121345191 5274 Embryophyte View MSA
123424941 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.32314 0.0 14.5342    
cufflinks 3.18625 0.0 9.11996    
cufflinks 11.0288 0.0 29.4379   High
cufflinks 3.70831 0.0 10.4281    
cufflinks 2.62482 0.0 7.7163    
cufflinks 5.75251 0.0 15.6158    
cufflinks 3.1377 0.0 9.02373    
cufflinks 3.32258 0.0 9.45538    
cufflinks 2.89248 0.0 8.37701    
cufflinks 1.693        
cufflinks 5.568     High High
cufflinks 3.459        
cufflinks 1.27       Low
cufflinks 0.864       Low
cufflinks 1.848        
cufflinks 2.16        
cufflinks 1.826        
cufflinks 2.15        
cufflinks 1.957        
cufflinks 2.249        
cufflinks 3.069        
cufflinks 2.429        
cufflinks 1.919        
cufflinks 6.651     High High
cufflinks 2.062        
cufflinks 3.065        

0 Strain