Gene : Glyma.10G024600 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11592:SF17 - GLUTATHIONE PEROXIDASE 4-RELATED Genomic Order:  246
Name:  ? Glyma.10G024600 Secondary Identifier:  ? PAC:30476368
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax DETOX1-PWY-1 Glycine max pathologic  
Gmax PWY-4081 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G024600 0.5kb upstream 0.5kb upstream 3822 true Chr10: 2164506-2168327 Glycine max
Glyma.10G024600 0.5kb upstream 0.5kb upstream 500 false Chr10: 2164506-2165005 Glycine max
Glyma.10G024600 0.5kb downstream 0.5kb downstream 3822 true Chr10: 2165006-2168827 Glycine max
Glyma.10G024600 0.5kb downstream 0.5kb downstream 500 false Chr10: 2168328-2168827 Glycine max
Glyma.10G024600 1.0kb upstream 1.0kb upstream 4322 true Chr10: 2164006-2168327 Glycine max
Glyma.10G024600 1.0kb upstream 1.0kb upstream 1000 false Chr10: 2164006-2165005 Glycine max
Glyma.10G024600 1.0kb downstream 1.0kb downstream 4322 true Chr10: 2165006-2169327 Glycine max
Glyma.10G024600 1.0kb downstream 1.0kb downstream 1000 false Chr10: 2168328-2169327 Glycine max
Glyma.10G024600 2.0kb upstream 2.0kb upstream 5322 true Chr10: 2163006-2168327 Glycine max
Glyma.10G024600 2.0kb upstream 2.0kb upstream 2000 false Chr10: 2163006-2165005 Glycine max
Glyma.10G024600 2.0kb downstream 2.0kb downstream 5322 true Chr10: 2165006-2170327 Glycine max
Glyma.10G024600 2.0kb downstream 2.0kb downstream 2000 false Chr10: 2168328-2170327 Glycine max
Glyma.10G024600 5.0kb upstream 5.0kb upstream 8322 true Chr10: 2160006-2168327 Glycine max
Glyma.10G024600 5.0kb upstream 5.0kb upstream 5000 false Chr10: 2160006-2165005 Glycine max
Glyma.10G024600 5.0kb downstream 5.0kb downstream 8322 true Chr10: 2165006-2173327 Glycine max
Glyma.10G024600 5.0kb downstream 5.0kb downstream 5000 false Chr10: 2168328-2173327 Glycine max
Glyma.10G024600 10.0kb upstream 10.0kb upstream 13322 true Chr10: 2155006-2168327 Glycine max
Glyma.10G024600 10.0kb upstream 10.0kb upstream 10000 false Chr10: 2155006-2165005 Glycine max
Glyma.10G024600 10.0kb downstream 10.0kb downstream 13322 true Chr10: 2165006-2178327 Glycine max
Glyma.10G024600 10.0kb downstream 10.0kb downstream 10000 false Chr10: 2168328-2178327 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026200 5273 Angiosperm View MSA
122297637 5265 Fabidae View MSA
124036094 5270 Rosid View MSA
123743608 5271 Pentapetalae View MSA
122796492 5272 Eudicot View MSA
121296225 5274 Embryophyte View MSA
123426849 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.00559714 0.0 0.0294356 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 9.65985 0.0 27.7815    
cufflinks 881.53 0.0 4320.37 High High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0436379 0.0 0.186081 Low  
cufflinks 9.73718 0.0 27.9386    
cufflinks 0.004     Low Low
cufflinks 0.189        
cufflinks 0.009     Low  
cufflinks 14.315     High High
cufflinks 2.06       High
cufflinks 0.005     Low Low
cufflinks 0.005     Low Low
cufflinks 0.238        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.037     Low  
cufflinks 0.077        
cufflinks 0.014     Low  
cufflinks 0.006     Low  
cufflinks 0.095        
cufflinks 0.044     Low  
cufflinks 0.667        

0 Strain