Gene : Glyma.10G027500 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR33057:SF21 - OVATE FAMILY PROTEIN 11-RELATED Genomic Order:  275
Name:  ? Glyma.10G027500 Secondary Identifier:  ? PAC:30476897
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G027500 0.5kb upstream 0.5kb upstream 1668 true Chr10: 2403942-2405609 Glycine max
Glyma.10G027500 0.5kb upstream 0.5kb upstream 500 false Chr10: 2405110-2405609 Glycine max
Glyma.10G027500 0.5kb downstream 0.5kb downstream 1668 true Chr10: 2403442-2405109 Glycine max
Glyma.10G027500 0.5kb downstream 0.5kb downstream 500 false Chr10: 2403442-2403941 Glycine max
Glyma.10G027500 1.0kb upstream 1.0kb upstream 2168 true Chr10: 2403942-2406109 Glycine max
Glyma.10G027500 1.0kb upstream 1.0kb upstream 1000 false Chr10: 2405110-2406109 Glycine max
Glyma.10G027500 1.0kb downstream 1.0kb downstream 2168 true Chr10: 2402942-2405109 Glycine max
Glyma.10G027500 1.0kb downstream 1.0kb downstream 1000 false Chr10: 2402942-2403941 Glycine max
Glyma.10G027500 2.0kb upstream 2.0kb upstream 3168 true Chr10: 2403942-2407109 Glycine max
Glyma.10G027500 2.0kb upstream 2.0kb upstream 2000 false Chr10: 2405110-2407109 Glycine max
Glyma.10G027500 2.0kb downstream 2.0kb downstream 3168 true Chr10: 2401942-2405109 Glycine max
Glyma.10G027500 2.0kb downstream 2.0kb downstream 2000 false Chr10: 2401942-2403941 Glycine max
Glyma.10G027500 5.0kb upstream 5.0kb upstream 6168 true Chr10: 2403942-2410109 Glycine max
Glyma.10G027500 5.0kb upstream 5.0kb upstream 5000 false Chr10: 2405110-2410109 Glycine max
Glyma.10G027500 5.0kb downstream 5.0kb downstream 6168 true Chr10: 2398942-2405109 Glycine max
Glyma.10G027500 5.0kb downstream 5.0kb downstream 5000 false Chr10: 2398942-2403941 Glycine max
Glyma.10G027500 10.0kb upstream 10.0kb upstream 11168 true Chr10: 2403942-2415109 Glycine max
Glyma.10G027500 10.0kb upstream 10.0kb upstream 10000 false Chr10: 2405110-2415109 Glycine max
Glyma.10G027500 10.0kb downstream 10.0kb downstream 11168 true Chr10: 2393942-2405109 Glycine max
Glyma.10G027500 10.0kb downstream 10.0kb downstream 10000 false Chr10: 2393942-2403941 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312940 5265 Fabidae View MSA
124065353 5270 Rosid View MSA
123736628 5271 Pentapetalae View MSA
122795583 5272 Eudicot View MSA
122050214 5273 Angiosperm View MSA
121311801 5274 Embryophyte View MSA
123349046 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.238542 0.0 0.93419    
cufflinks 0.782979 0.0 2.91183    
cufflinks 0.0840893 0.0 0.343443 Low Low
cufflinks 0.530948 0.0 2.00978    
cufflinks 4.05134 0.0 13.0752   High
cufflinks 3.73753 0.0 12.2051   High
cufflinks 0.133322 0.0 0.533307 Low Low
cufflinks 0.380514 0.0 1.46037    
cufflinks 2.798 0.0 9.46575   High
cufflinks 0.267        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.068     Low  
cufflinks 2.725       High
cufflinks 4.284       High
cufflinks 0.016     Low Low
cufflinks 0.08     Low  
cufflinks 0.025     Low  
cufflinks 0.138        
cufflinks 1.078       High
cufflinks 0.059     Low  
cufflinks 0.015     Low Low
cufflinks 0.11        
cufflinks 0.032     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.067     Low  
cufflinks 0.041     Low  

0 Strain