Gene : Glyma.10G079000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11638//PTHR11638:SF69 - ATP-DEPENDENT CLP PROTEASE Genomic Order:  790
Name:  ? Glyma.10G079000 Secondary Identifier:  ? PAC:30475680
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G079000 0.5kb upstream 0.5kb upstream 5361 true Chr10: 8944842-8950202 Glycine max
Glyma.10G079000 0.5kb upstream 0.5kb upstream 500 false Chr10: 8944842-8945341 Glycine max
Glyma.10G079000 0.5kb downstream 0.5kb downstream 5361 true Chr10: 8945342-8950702 Glycine max
Glyma.10G079000 0.5kb downstream 0.5kb downstream 500 false Chr10: 8950203-8950702 Glycine max
Glyma.10G079000 1.0kb upstream 1.0kb upstream 5861 true Chr10: 8944342-8950202 Glycine max
Glyma.10G079000 1.0kb upstream 1.0kb upstream 1000 false Chr10: 8944342-8945341 Glycine max
Glyma.10G079000 1.0kb downstream 1.0kb downstream 5861 true Chr10: 8945342-8951202 Glycine max
Glyma.10G079000 1.0kb downstream 1.0kb downstream 1000 false Chr10: 8950203-8951202 Glycine max
Glyma.10G079000 2.0kb upstream 2.0kb upstream 6861 true Chr10: 8943342-8950202 Glycine max
Glyma.10G079000 2.0kb upstream 2.0kb upstream 2000 false Chr10: 8943342-8945341 Glycine max
Glyma.10G079000 2.0kb downstream 2.0kb downstream 6861 true Chr10: 8945342-8952202 Glycine max
Glyma.10G079000 2.0kb downstream 2.0kb downstream 2000 false Chr10: 8950203-8952202 Glycine max
Glyma.10G079000 5.0kb upstream 5.0kb upstream 9861 true Chr10: 8940342-8950202 Glycine max
Glyma.10G079000 5.0kb upstream 5.0kb upstream 5000 false Chr10: 8940342-8945341 Glycine max
Glyma.10G079000 5.0kb downstream 5.0kb downstream 9861 true Chr10: 8945342-8955202 Glycine max
Glyma.10G079000 5.0kb downstream 5.0kb downstream 5000 false Chr10: 8950203-8955202 Glycine max
Glyma.10G079000 10.0kb upstream 10.0kb upstream 14861 true Chr10: 8935342-8950202 Glycine max
Glyma.10G079000 10.0kb upstream 10.0kb upstream 10000 false Chr10: 8935342-8945341 Glycine max
Glyma.10G079000 10.0kb downstream 10.0kb downstream 14861 true Chr10: 8945342-8960202 Glycine max
Glyma.10G079000 10.0kb downstream 10.0kb downstream 10000 false Chr10: 8950203-8960202 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306559 5265 Fabidae View MSA
124070007 5270 Rosid View MSA
123743418 5271 Pentapetalae View MSA
122787302 5272 Eudicot View MSA
122049419 5273 Angiosperm View MSA
121351273 5274 Embryophyte View MSA
123382090 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.614931 0.0 2.13755    
cufflinks 0.796066 0.0 2.69249    
cufflinks 0.740398 0.0 2.52214    
cufflinks 0.344679 0.0 1.24941   Low
cufflinks 0.978091 0.0 3.22721    
cufflinks 0.354879 0.0 1.28554   Low
cufflinks 0.68429 0.0 2.3548    
cufflinks 1.02193 0.0 3.34172    
cufflinks 1.27092 0.0 4.04007   High
cufflinks 1.113        
cufflinks 1.33        
cufflinks 0.951        
cufflinks 1.546        
cufflinks 0.796        
cufflinks 0.701        
cufflinks 1.585        
cufflinks 0.237       Low
cufflinks 1.232        
cufflinks 0.617        
cufflinks 1.161        
cufflinks 0.99        
cufflinks 1.383        
cufflinks 1.257        
cufflinks 2.122       High
cufflinks 1.057        
cufflinks 0.327       Low

0 Strain