Gene : Glyma.10G081400 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR12642:SF0 - RIBOSOME BIOGENESIS PROTEIN NSA2 HOMOLOG Genomic Order:  814
Name:  ? Glyma.10G081400 Secondary Identifier:  ? PAC:30476681
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G081400 0.5kb upstream 0.5kb upstream 3297 true Chr10: 9651272-9654568 Glycine max
Glyma.10G081400 0.5kb upstream 0.5kb upstream 500 false Chr10: 9651272-9651771 Glycine max
Glyma.10G081400 0.5kb downstream 0.5kb downstream 3297 true Chr10: 9651772-9655068 Glycine max
Glyma.10G081400 0.5kb downstream 0.5kb downstream 500 false Chr10: 9654569-9655068 Glycine max
Glyma.10G081400 1.0kb upstream 1.0kb upstream 3797 true Chr10: 9650772-9654568 Glycine max
Glyma.10G081400 1.0kb upstream 1.0kb upstream 1000 false Chr10: 9650772-9651771 Glycine max
Glyma.10G081400 1.0kb downstream 1.0kb downstream 3797 true Chr10: 9651772-9655568 Glycine max
Glyma.10G081400 1.0kb downstream 1.0kb downstream 1000 false Chr10: 9654569-9655568 Glycine max
Glyma.10G081400 2.0kb upstream 2.0kb upstream 4797 true Chr10: 9649772-9654568 Glycine max
Glyma.10G081400 2.0kb upstream 2.0kb upstream 2000 false Chr10: 9649772-9651771 Glycine max
Glyma.10G081400 2.0kb downstream 2.0kb downstream 4797 true Chr10: 9651772-9656568 Glycine max
Glyma.10G081400 2.0kb downstream 2.0kb downstream 2000 false Chr10: 9654569-9656568 Glycine max
Glyma.10G081400 5.0kb upstream 5.0kb upstream 7797 true Chr10: 9646772-9654568 Glycine max
Glyma.10G081400 5.0kb upstream 5.0kb upstream 5000 false Chr10: 9646772-9651771 Glycine max
Glyma.10G081400 5.0kb downstream 5.0kb downstream 7797 true Chr10: 9651772-9659568 Glycine max
Glyma.10G081400 5.0kb downstream 5.0kb downstream 5000 false Chr10: 9654569-9659568 Glycine max
Glyma.10G081400 10.0kb upstream 10.0kb upstream 12797 true Chr10: 9641772-9654568 Glycine max
Glyma.10G081400 10.0kb upstream 10.0kb upstream 10000 false Chr10: 9641772-9651771 Glycine max
Glyma.10G081400 10.0kb downstream 10.0kb downstream 12797 true Chr10: 9651772-9664568 Glycine max
Glyma.10G081400 10.0kb downstream 10.0kb downstream 10000 false Chr10: 9654569-9664568 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312013 5265 Fabidae View MSA
124061580 5270 Rosid View MSA
123741663 5271 Pentapetalae View MSA
122796329 5272 Eudicot View MSA
122043464 5273 Angiosperm View MSA
121344863 5274 Embryophyte View MSA
123424224 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.3684 0.0 38.8528    
cufflinks 14.5016 0.0 39.1615    
cufflinks 6.44392 0.0 18.6548   Low
cufflinks 14.3499 0.0 38.753    
cufflinks 17.7286 0.0 47.5118    
cufflinks 14.3773 0.0 38.8579    
cufflinks 18.4745 0.0 49.4545   High
cufflinks 11.6679 0.0 31.8922    
cufflinks 13.6726 0.0 37.01    
cufflinks 4.419        
cufflinks 2.979       Low
cufflinks 5.253        
cufflinks 11.79     High High
cufflinks 14.399     High High
cufflinks 3.2       Low
cufflinks 6.502        
cufflinks 3.151       Low
cufflinks 5.473        
cufflinks 8.498     High  
cufflinks 6.372        
cufflinks 3.353        
cufflinks 6.752        
cufflinks 8.699     High  
cufflinks 2.431       Low
cufflinks 6.785        
cufflinks 3.889        

0 Strain