Gene : Glyma.10G087100 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR24349:SF81 - CALCIUM-DEPENDENT PROTEIN KINASE 20 Genomic Order:  871
Name:  ? Glyma.10G087100 Secondary Identifier:  ? PAC:30476858
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G087100 0.5kb upstream 0.5kb upstream 7782 true Chr10: 11217801-11225582 Glycine max
Glyma.10G087100 0.5kb upstream 0.5kb upstream 500 false Chr10: 11225083-11225582 Glycine max
Glyma.10G087100 0.5kb downstream 0.5kb downstream 7782 true Chr10: 11217301-11225082 Glycine max
Glyma.10G087100 0.5kb downstream 0.5kb downstream 500 false Chr10: 11217301-11217800 Glycine max
Glyma.10G087100 1.0kb upstream 1.0kb upstream 8282 true Chr10: 11217801-11226082 Glycine max
Glyma.10G087100 1.0kb upstream 1.0kb upstream 1000 false Chr10: 11225083-11226082 Glycine max
Glyma.10G087100 1.0kb downstream 1.0kb downstream 8282 true Chr10: 11216801-11225082 Glycine max
Glyma.10G087100 1.0kb downstream 1.0kb downstream 1000 false Chr10: 11216801-11217800 Glycine max
Glyma.10G087100 2.0kb upstream 2.0kb upstream 9282 true Chr10: 11217801-11227082 Glycine max
Glyma.10G087100 2.0kb upstream 2.0kb upstream 2000 false Chr10: 11225083-11227082 Glycine max
Glyma.10G087100 2.0kb downstream 2.0kb downstream 9282 true Chr10: 11215801-11225082 Glycine max
Glyma.10G087100 2.0kb downstream 2.0kb downstream 2000 false Chr10: 11215801-11217800 Glycine max
Glyma.10G087100 5.0kb upstream 5.0kb upstream 12282 true Chr10: 11217801-11230082 Glycine max
Glyma.10G087100 5.0kb upstream 5.0kb upstream 5000 false Chr10: 11225083-11230082 Glycine max
Glyma.10G087100 5.0kb downstream 5.0kb downstream 12282 true Chr10: 11212801-11225082 Glycine max
Glyma.10G087100 5.0kb downstream 5.0kb downstream 5000 false Chr10: 11212801-11217800 Glycine max
Glyma.10G087100 10.0kb upstream 10.0kb upstream 17282 true Chr10: 11217801-11235082 Glycine max
Glyma.10G087100 10.0kb upstream 10.0kb upstream 10000 false Chr10: 11225083-11235082 Glycine max
Glyma.10G087100 10.0kb downstream 10.0kb downstream 17282 true Chr10: 11207801-11225082 Glycine max
Glyma.10G087100 10.0kb downstream 10.0kb downstream 10000 false Chr10: 11207801-11217800 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299570 5265 Fabidae View MSA
124067641 5270 Rosid View MSA
123746837 5271 Pentapetalae View MSA
122788348 5272 Eudicot View MSA
122047309 5273 Angiosperm View MSA
121350946 5274 Embryophyte View MSA
123428456 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0423771 0.0 0.169649 Low Low
cufflinks 0.0909687 0.0 0.354378 Low Low
cufflinks 0.998047 0.0 3.34789    
cufflinks 0.371542 0.0 1.35416    
cufflinks 5.27047 0.0 14.378   High
cufflinks 4.09845 0.0 11.4101   High
cufflinks 0.506801 0.0 1.80915    
cufflinks 0.808276 0.0 2.77658    
cufflinks 1.50632 0.0 4.77862    
cufflinks 0.031     Low  
cufflinks 0.48        
cufflinks 0.237        
cufflinks 1.57       High
cufflinks 1.789       High
cufflinks 0.384        
cufflinks 0.007     Low Low
cufflinks 0.208        
cufflinks 0.6        
cufflinks 0.004     Low Low
cufflinks 0.002     Low Low
cufflinks 0.65        
cufflinks 0.009     Low  
cufflinks 0.009     Low  
cufflinks 0.95       High
cufflinks 0.002     Low Low
cufflinks 0.1        

0 Strain