Gene : Glyma.10G075200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10555:SF122 - SORTING NEXIN 1 Genomic Order:  752
Name:  ? Glyma.10G075200 Secondary Identifier:  ? PAC:30474274
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G075200 0.5kb upstream 0.5kb upstream 8407 true Chr10: 7770459-7778865 Glycine max
Glyma.10G075200 0.5kb upstream 0.5kb upstream 500 false Chr10: 7778366-7778865 Glycine max
Glyma.10G075200 0.5kb downstream 0.5kb downstream 8407 true Chr10: 7769959-7778365 Glycine max
Glyma.10G075200 0.5kb downstream 0.5kb downstream 500 false Chr10: 7769959-7770458 Glycine max
Glyma.10G075200 1.0kb upstream 1.0kb upstream 8907 true Chr10: 7770459-7779365 Glycine max
Glyma.10G075200 1.0kb upstream 1.0kb upstream 1000 false Chr10: 7778366-7779365 Glycine max
Glyma.10G075200 1.0kb downstream 1.0kb downstream 8907 true Chr10: 7769459-7778365 Glycine max
Glyma.10G075200 1.0kb downstream 1.0kb downstream 1000 false Chr10: 7769459-7770458 Glycine max
Glyma.10G075200 2.0kb upstream 2.0kb upstream 9907 true Chr10: 7770459-7780365 Glycine max
Glyma.10G075200 2.0kb upstream 2.0kb upstream 2000 false Chr10: 7778366-7780365 Glycine max
Glyma.10G075200 2.0kb downstream 2.0kb downstream 9907 true Chr10: 7768459-7778365 Glycine max
Glyma.10G075200 2.0kb downstream 2.0kb downstream 2000 false Chr10: 7768459-7770458 Glycine max
Glyma.10G075200 5.0kb upstream 5.0kb upstream 12907 true Chr10: 7770459-7783365 Glycine max
Glyma.10G075200 5.0kb upstream 5.0kb upstream 5000 false Chr10: 7778366-7783365 Glycine max
Glyma.10G075200 5.0kb downstream 5.0kb downstream 12907 true Chr10: 7765459-7778365 Glycine max
Glyma.10G075200 5.0kb downstream 5.0kb downstream 5000 false Chr10: 7765459-7770458 Glycine max
Glyma.10G075200 10.0kb upstream 10.0kb upstream 17907 true Chr10: 7770459-7788365 Glycine max
Glyma.10G075200 10.0kb upstream 10.0kb upstream 10000 false Chr10: 7778366-7788365 Glycine max
Glyma.10G075200 10.0kb downstream 10.0kb downstream 17907 true Chr10: 7760459-7778365 Glycine max
Glyma.10G075200 10.0kb downstream 10.0kb downstream 10000 false Chr10: 7760459-7770458 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300611 5265 Fabidae View MSA
124066249 5270 Rosid View MSA
123741756 5271 Pentapetalae View MSA
122792565 5272 Eudicot View MSA
122045293 5273 Angiosperm View MSA
121345603 5274 Embryophyte View MSA
123428162 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.9771 0.0 34.3006    
cufflinks 11.4217 0.0 36.4565    
cufflinks 7.93698 0.0 25.7928   Low
cufflinks 15.4337 0.0 47.9721    
cufflinks 13.4895 0.0 42.2329    
cufflinks 13.0767 0.0 40.6105    
cufflinks 21.1281 0.0 64.9539   High
cufflinks 14.5379 0.0 45.9993    
cufflinks 12.9762 0.0 40.462    
cufflinks 1.49        
cufflinks 0.756       Low
cufflinks 1.208        
cufflinks 1.831       High
cufflinks 1.967       High
cufflinks 1.065        
cufflinks 1.204        
cufflinks 0.718       Low
cufflinks 1.423        
cufflinks 1.543        
cufflinks 1.089        
cufflinks 1.016        
cufflinks 1.185        
cufflinks 1.079        
cufflinks 0.865       Low
cufflinks 1.11        
cufflinks 1.103        

0 Strain