Gene : Glyma.10G075900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR14009:SF9 - LETM1-LIKE PROTEIN Genomic Order:  759
Name:  ? Glyma.10G075900 Secondary Identifier:  ? PAC:30475969
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G075900 0.5kb upstream 0.5kb upstream 29620 true Chr10: 7871309-7900928 Glycine max
Glyma.10G075900 0.5kb upstream 0.5kb upstream 500 false Chr10: 7871309-7871808 Glycine max
Glyma.10G075900 0.5kb downstream 0.5kb downstream 29620 true Chr10: 7871809-7901428 Glycine max
Glyma.10G075900 0.5kb downstream 0.5kb downstream 500 false Chr10: 7900929-7901428 Glycine max
Glyma.10G075900 1.0kb upstream 1.0kb upstream 30120 true Chr10: 7870809-7900928 Glycine max
Glyma.10G075900 1.0kb upstream 1.0kb upstream 1000 false Chr10: 7870809-7871808 Glycine max
Glyma.10G075900 1.0kb downstream 1.0kb downstream 30120 true Chr10: 7871809-7901928 Glycine max
Glyma.10G075900 1.0kb downstream 1.0kb downstream 1000 false Chr10: 7900929-7901928 Glycine max
Glyma.10G075900 2.0kb upstream 2.0kb upstream 31120 true Chr10: 7869809-7900928 Glycine max
Glyma.10G075900 2.0kb upstream 2.0kb upstream 2000 false Chr10: 7869809-7871808 Glycine max
Glyma.10G075900 2.0kb downstream 2.0kb downstream 31120 true Chr10: 7871809-7902928 Glycine max
Glyma.10G075900 2.0kb downstream 2.0kb downstream 2000 false Chr10: 7900929-7902928 Glycine max
Glyma.10G075900 5.0kb upstream 5.0kb upstream 34120 true Chr10: 7866809-7900928 Glycine max
Glyma.10G075900 5.0kb upstream 5.0kb upstream 5000 false Chr10: 7866809-7871808 Glycine max
Glyma.10G075900 5.0kb downstream 5.0kb downstream 34120 true Chr10: 7871809-7905928 Glycine max
Glyma.10G075900 5.0kb downstream 5.0kb downstream 5000 false Chr10: 7900929-7905928 Glycine max
Glyma.10G075900 10.0kb upstream 10.0kb upstream 39120 true Chr10: 7861809-7900928 Glycine max
Glyma.10G075900 10.0kb upstream 10.0kb upstream 10000 false Chr10: 7861809-7871808 Glycine max
Glyma.10G075900 10.0kb downstream 10.0kb downstream 39120 true Chr10: 7871809-7910928 Glycine max
Glyma.10G075900 10.0kb downstream 10.0kb downstream 10000 false Chr10: 7900929-7910928 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304547 5265 Fabidae View MSA
124063652 5270 Rosid View MSA
123740190 5271 Pentapetalae View MSA
122788808 5272 Eudicot View MSA
122047969 5273 Angiosperm View MSA
121348078 5274 Embryophyte View MSA
123380722 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.9388 0.0 56.9307   High
cufflinks 4.76332 0.0 14.4721    
cufflinks 5.50712 0.0 21.367    
cufflinks 3.59899 0.0 14.7287    
cufflinks 3.00646 0.0 13.0746    
cufflinks 2.96314 0.0 12.1798    
cufflinks 9.1161 0.0 27.3904   High
cufflinks 4.51402 0.0 13.7894    
cufflinks 3.16046 0.0 10.1715    
cufflinks 0.203        
cufflinks 0.279        
cufflinks 0.217        
cufflinks 0.123       Low
cufflinks 0.115       Low
cufflinks 0.262        
cufflinks 0.693       High
cufflinks 0.143       Low
cufflinks 0.21        
cufflinks 0.275        
cufflinks 0.693       High
cufflinks 0.219        
cufflinks 0.669       High
cufflinks 0.467        
cufflinks 0.238        
cufflinks 0.829       High
cufflinks 0.14       Low

0 Strain