Gene : Glyma.10G076000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR32285:SF53 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 8-RELATED Genomic Order:  760
Name:  ? Glyma.10G076000 Secondary Identifier:  ? PAC:30478345
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G076000 0.5kb upstream 0.5kb upstream 3399 true Chr10: 7900133-7903531 Glycine max
Glyma.10G076000 0.5kb upstream 0.5kb upstream 500 false Chr10: 7903032-7903531 Glycine max
Glyma.10G076000 0.5kb downstream 0.5kb downstream 3399 true Chr10: 7899633-7903031 Glycine max
Glyma.10G076000 0.5kb downstream 0.5kb downstream 500 false Chr10: 7899633-7900132 Glycine max
Glyma.10G076000 1.0kb upstream 1.0kb upstream 3899 true Chr10: 7900133-7904031 Glycine max
Glyma.10G076000 1.0kb upstream 1.0kb upstream 1000 false Chr10: 7903032-7904031 Glycine max
Glyma.10G076000 1.0kb downstream 1.0kb downstream 3899 true Chr10: 7899133-7903031 Glycine max
Glyma.10G076000 1.0kb downstream 1.0kb downstream 1000 false Chr10: 7899133-7900132 Glycine max
Glyma.10G076000 2.0kb upstream 2.0kb upstream 4899 true Chr10: 7900133-7905031 Glycine max
Glyma.10G076000 2.0kb upstream 2.0kb upstream 2000 false Chr10: 7903032-7905031 Glycine max
Glyma.10G076000 2.0kb downstream 2.0kb downstream 4899 true Chr10: 7898133-7903031 Glycine max
Glyma.10G076000 2.0kb downstream 2.0kb downstream 2000 false Chr10: 7898133-7900132 Glycine max
Glyma.10G076000 5.0kb upstream 5.0kb upstream 7899 true Chr10: 7900133-7908031 Glycine max
Glyma.10G076000 5.0kb upstream 5.0kb upstream 5000 false Chr10: 7903032-7908031 Glycine max
Glyma.10G076000 5.0kb downstream 5.0kb downstream 7899 true Chr10: 7895133-7903031 Glycine max
Glyma.10G076000 5.0kb downstream 5.0kb downstream 5000 false Chr10: 7895133-7900132 Glycine max
Glyma.10G076000 10.0kb upstream 10.0kb upstream 12899 true Chr10: 7900133-7913031 Glycine max
Glyma.10G076000 10.0kb upstream 10.0kb upstream 10000 false Chr10: 7903032-7913031 Glycine max
Glyma.10G076000 10.0kb downstream 10.0kb downstream 12899 true Chr10: 7890133-7903031 Glycine max
Glyma.10G076000 10.0kb downstream 10.0kb downstream 10000 false Chr10: 7890133-7900132 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302332 5265 Fabidae View MSA
124060600 5270 Rosid View MSA
123745624 5271 Pentapetalae View MSA
122797188 5272 Eudicot View MSA
122050805 5273 Angiosperm View MSA
123428901 5275 Viridiplantae View MSA
121350671 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.68904 0.0 32.9231   High
cufflinks 1.87002 0.0 10.8671    
cufflinks 2.0729 0.0 12.1328    
cufflinks 1.59825 0.0 8.97322    
cufflinks 1.03922 0.0 6.46364    
cufflinks 0.834982 0.0 5.68987   Low
cufflinks 3.35954 0.0 19.5385   High
cufflinks 1.41306 0.0 8.89242    
cufflinks 1.07521 0.0 6.75998    
cufflinks 0.021     Low  
cufflinks 0.006     Low  
cufflinks 0.056     Low High
cufflinks 0.005     Low Low
cufflinks 0.017     Low  
cufflinks 0.013     Low  
cufflinks 0.03     Low  
cufflinks 0.005     Low Low
cufflinks 0.342       High
cufflinks 0.009     Low  
cufflinks 0.031     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.032     Low  
cufflinks 0.006     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.029     Low  
cufflinks 0.014     Low  

0 Strain