Gene : Glyma.10G065300 G. max Wm82.a2.v1
Defline:  (1 of 2) 2.4.99.12 - Lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase / Lipid IV(A) KDO transferase Genomic Order:  653
Name:  ? Glyma.10G065300 Secondary Identifier:  ? PAC:30477979
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax KDOSYN-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G065300 0.5kb upstream 0.5kb upstream 5977 true Chr10: 6236296-6242272 Glycine max
Glyma.10G065300 0.5kb upstream 0.5kb upstream 500 false Chr10: 6241773-6242272 Glycine max
Glyma.10G065300 0.5kb downstream 0.5kb downstream 5977 true Chr10: 6235796-6241772 Glycine max
Glyma.10G065300 0.5kb downstream 0.5kb downstream 500 false Chr10: 6235796-6236295 Glycine max
Glyma.10G065300 1.0kb upstream 1.0kb upstream 6477 true Chr10: 6236296-6242772 Glycine max
Glyma.10G065300 1.0kb upstream 1.0kb upstream 1000 false Chr10: 6241773-6242772 Glycine max
Glyma.10G065300 1.0kb downstream 1.0kb downstream 6477 true Chr10: 6235296-6241772 Glycine max
Glyma.10G065300 1.0kb downstream 1.0kb downstream 1000 false Chr10: 6235296-6236295 Glycine max
Glyma.10G065300 2.0kb upstream 2.0kb upstream 7477 true Chr10: 6236296-6243772 Glycine max
Glyma.10G065300 2.0kb upstream 2.0kb upstream 2000 false Chr10: 6241773-6243772 Glycine max
Glyma.10G065300 2.0kb downstream 2.0kb downstream 7477 true Chr10: 6234296-6241772 Glycine max
Glyma.10G065300 2.0kb downstream 2.0kb downstream 2000 false Chr10: 6234296-6236295 Glycine max
Glyma.10G065300 5.0kb upstream 5.0kb upstream 10477 true Chr10: 6236296-6246772 Glycine max
Glyma.10G065300 5.0kb upstream 5.0kb upstream 5000 false Chr10: 6241773-6246772 Glycine max
Glyma.10G065300 5.0kb downstream 5.0kb downstream 10477 true Chr10: 6231296-6241772 Glycine max
Glyma.10G065300 5.0kb downstream 5.0kb downstream 5000 false Chr10: 6231296-6236295 Glycine max
Glyma.10G065300 10.0kb upstream 10.0kb upstream 15477 true Chr10: 6236296-6251772 Glycine max
Glyma.10G065300 10.0kb upstream 10.0kb upstream 10000 false Chr10: 6241773-6251772 Glycine max
Glyma.10G065300 10.0kb downstream 10.0kb downstream 15477 true Chr10: 6226296-6241772 Glycine max
Glyma.10G065300 10.0kb downstream 10.0kb downstream 10000 false Chr10: 6226296-6236295 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305101 5265 Fabidae View MSA
124064068 5270 Rosid View MSA
123737995 5271 Pentapetalae View MSA
122793703 5272 Eudicot View MSA
122042607 5273 Angiosperm View MSA
121344444 5274 Embryophyte View MSA
123380045 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.74204 0.0 17.9558    
cufflinks 4.25039 0.0 16.6869    
cufflinks 4.48673 0.0 20.2819    
cufflinks 4.21847 0.0 16.663    
cufflinks 5.62474 0.0 26.3352   High
cufflinks 2.66345 0.0 14.3958   Low
cufflinks 5.95904 0.0 27.5576   High
cufflinks 3.92429 0.0 18.4873    
cufflinks 4.46513 0.0 20.2077    
cufflinks 0.2        
cufflinks 0.13       Low
cufflinks 0.311        
cufflinks 0.323        
cufflinks 0.445       High
cufflinks 0.242        
cufflinks 0.192        
cufflinks 0.122       Low
cufflinks 0.386       High
cufflinks 0.401       High
cufflinks 0.227        
cufflinks 0.161        
cufflinks 0.191        
cufflinks 0.259        
cufflinks 0.108       Low
cufflinks 0.238        
cufflinks 0.143       Low

0 Strain