Gene : Glyma.10G066300 G. max Wm82.a2.v1
Defline:  (1 of 7) PTHR15921 - PRE-MRNA CLEAVAGE COMPLEX II Genomic Order:  663
Name:  ? Glyma.10G066300 Secondary Identifier:  ? PAC:30477500
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G066300 0.5kb upstream 0.5kb upstream 7974 true Chr10: 6419965-6427938 Glycine max
Glyma.10G066300 0.5kb upstream 0.5kb upstream 500 false Chr10: 6419965-6420464 Glycine max
Glyma.10G066300 0.5kb downstream 0.5kb downstream 7974 true Chr10: 6420465-6428438 Glycine max
Glyma.10G066300 0.5kb downstream 0.5kb downstream 500 false Chr10: 6427939-6428438 Glycine max
Glyma.10G066300 1.0kb upstream 1.0kb upstream 8474 true Chr10: 6419465-6427938 Glycine max
Glyma.10G066300 1.0kb upstream 1.0kb upstream 1000 false Chr10: 6419465-6420464 Glycine max
Glyma.10G066300 1.0kb downstream 1.0kb downstream 8474 true Chr10: 6420465-6428938 Glycine max
Glyma.10G066300 1.0kb downstream 1.0kb downstream 1000 false Chr10: 6427939-6428938 Glycine max
Glyma.10G066300 2.0kb upstream 2.0kb upstream 9474 true Chr10: 6418465-6427938 Glycine max
Glyma.10G066300 2.0kb upstream 2.0kb upstream 2000 false Chr10: 6418465-6420464 Glycine max
Glyma.10G066300 2.0kb downstream 2.0kb downstream 9474 true Chr10: 6420465-6429938 Glycine max
Glyma.10G066300 2.0kb downstream 2.0kb downstream 2000 false Chr10: 6427939-6429938 Glycine max
Glyma.10G066300 5.0kb upstream 5.0kb upstream 12474 true Chr10: 6415465-6427938 Glycine max
Glyma.10G066300 5.0kb upstream 5.0kb upstream 5000 false Chr10: 6415465-6420464 Glycine max
Glyma.10G066300 5.0kb downstream 5.0kb downstream 12474 true Chr10: 6420465-6432938 Glycine max
Glyma.10G066300 5.0kb downstream 5.0kb downstream 5000 false Chr10: 6427939-6432938 Glycine max
Glyma.10G066300 10.0kb upstream 10.0kb upstream 17474 true Chr10: 6410465-6427938 Glycine max
Glyma.10G066300 10.0kb upstream 10.0kb upstream 10000 false Chr10: 6410465-6420464 Glycine max
Glyma.10G066300 10.0kb downstream 10.0kb downstream 17474 true Chr10: 6420465-6437938 Glycine max
Glyma.10G066300 10.0kb downstream 10.0kb downstream 10000 false Chr10: 6427939-6437938 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122253718 5265 Fabidae View MSA
124072237 5270 Rosid View MSA
123741427 5271 Pentapetalae View MSA
122796233 5272 Eudicot View MSA
122048698 5273 Angiosperm View MSA
121349751 5274 Embryophyte View MSA
123426332 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.08775 0.0 22.0304    
cufflinks 5.04037 0.0 19.2356    
cufflinks 7.54867 0.0 27.0696   High
cufflinks 4.71248 0.0 17.8356    
cufflinks 4.73841 0.0 17.6697    
cufflinks 4.47292 0.0 18.1294   Low
cufflinks 6.40694 0.0 19.513    
cufflinks 5.2657 0.0 19.4508    
cufflinks 6.19474 0.0 22.4452    
cufflinks 1.023       Low
cufflinks 1.448        
cufflinks 1.816       High
cufflinks 1.068       Low
cufflinks 1.035       Low
cufflinks 2.864       High
cufflinks 1.23        
cufflinks 1.347        
cufflinks 1.497        
cufflinks 1.45        
cufflinks 1.515        
cufflinks 1.236        
cufflinks 1.493        
cufflinks 1.222        
cufflinks 1.212        
cufflinks 1.388        
cufflinks 1.306        

0 Strain