Gene : Glyma.10G066800 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR21654:SF5 - TRIHELIX TRANSCRIPTION FACTOR PTL Genomic Order:  668
Name:  ? Glyma.10G066800 Secondary Identifier:  ? PAC:30477297
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G066800 0.5kb upstream 0.5kb upstream 4355 true Chr10: 6494688-6499042 Glycine max
Glyma.10G066800 0.5kb upstream 0.5kb upstream 500 false Chr10: 6498543-6499042 Glycine max
Glyma.10G066800 0.5kb downstream 0.5kb downstream 4355 true Chr10: 6494188-6498542 Glycine max
Glyma.10G066800 0.5kb downstream 0.5kb downstream 500 false Chr10: 6494188-6494687 Glycine max
Glyma.10G066800 1.0kb upstream 1.0kb upstream 4855 true Chr10: 6494688-6499542 Glycine max
Glyma.10G066800 1.0kb upstream 1.0kb upstream 1000 false Chr10: 6498543-6499542 Glycine max
Glyma.10G066800 1.0kb downstream 1.0kb downstream 4855 true Chr10: 6493688-6498542 Glycine max
Glyma.10G066800 1.0kb downstream 1.0kb downstream 1000 false Chr10: 6493688-6494687 Glycine max
Glyma.10G066800 2.0kb upstream 2.0kb upstream 5855 true Chr10: 6494688-6500542 Glycine max
Glyma.10G066800 2.0kb upstream 2.0kb upstream 2000 false Chr10: 6498543-6500542 Glycine max
Glyma.10G066800 2.0kb downstream 2.0kb downstream 5855 true Chr10: 6492688-6498542 Glycine max
Glyma.10G066800 2.0kb downstream 2.0kb downstream 2000 false Chr10: 6492688-6494687 Glycine max
Glyma.10G066800 5.0kb upstream 5.0kb upstream 8855 true Chr10: 6494688-6503542 Glycine max
Glyma.10G066800 5.0kb upstream 5.0kb upstream 5000 false Chr10: 6498543-6503542 Glycine max
Glyma.10G066800 5.0kb downstream 5.0kb downstream 8855 true Chr10: 6489688-6498542 Glycine max
Glyma.10G066800 5.0kb downstream 5.0kb downstream 5000 false Chr10: 6489688-6494687 Glycine max
Glyma.10G066800 10.0kb upstream 10.0kb upstream 13855 true Chr10: 6494688-6508542 Glycine max
Glyma.10G066800 10.0kb upstream 10.0kb upstream 10000 false Chr10: 6498543-6508542 Glycine max
Glyma.10G066800 10.0kb downstream 10.0kb downstream 13855 true Chr10: 6484688-6498542 Glycine max
Glyma.10G066800 10.0kb downstream 10.0kb downstream 10000 false Chr10: 6484688-6494687 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311371 5265 Fabidae View MSA
124071653 5270 Rosid View MSA
123751862 5271 Pentapetalae View MSA
122786216 5272 Eudicot View MSA
122049868 5273 Angiosperm View MSA
121349901 5274 Embryophyte View MSA
123381491 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.74543 0.0 4.07012    
cufflinks 3.43267 0.0 12.1405   High
cufflinks 0.970017 0.0 4.93294    
cufflinks 2.93217 0.0 12.7645   High
cufflinks 0.566676 0.0 3.89525   Low
cufflinks 0.528507 0.0 3.07795   Low
cufflinks 1.39136 0.0 7.66074    
cufflinks 1.69938 0.0 7.34542    
cufflinks 0.74406 0.0 4.13949    
cufflinks 0.512        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.694        
cufflinks 0.003     Low Low
cufflinks 0.032     Low  
cufflinks 0.059        
cufflinks 0.314        
cufflinks 0.019     Low  
cufflinks 1.427       High
cufflinks 0.941       High
cufflinks 0.143        
cufflinks 0.002     Low Low
cufflinks 0.25        
cufflinks 0.557        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.242        
cufflinks 0.001     Low Low

0 Strain