Gene : Glyma.10G052700 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR12713 - VACUOLAR ATP SYNTHASE SUBUNIT G Genomic Order:  527
Name:  ? Glyma.10G052700 Secondary Identifier:  ? PAC:30476381
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G052700 0.5kb upstream 0.5kb upstream 2889 true Chr10: 4769532-4772420 Glycine max
Glyma.10G052700 0.5kb upstream 0.5kb upstream 500 false Chr10: 4771921-4772420 Glycine max
Glyma.10G052700 0.5kb downstream 0.5kb downstream 2889 true Chr10: 4769032-4771920 Glycine max
Glyma.10G052700 0.5kb downstream 0.5kb downstream 500 false Chr10: 4769032-4769531 Glycine max
Glyma.10G052700 1.0kb upstream 1.0kb upstream 3389 true Chr10: 4769532-4772920 Glycine max
Glyma.10G052700 1.0kb upstream 1.0kb upstream 1000 false Chr10: 4771921-4772920 Glycine max
Glyma.10G052700 1.0kb downstream 1.0kb downstream 3389 true Chr10: 4768532-4771920 Glycine max
Glyma.10G052700 1.0kb downstream 1.0kb downstream 1000 false Chr10: 4768532-4769531 Glycine max
Glyma.10G052700 2.0kb upstream 2.0kb upstream 4389 true Chr10: 4769532-4773920 Glycine max
Glyma.10G052700 2.0kb upstream 2.0kb upstream 2000 false Chr10: 4771921-4773920 Glycine max
Glyma.10G052700 2.0kb downstream 2.0kb downstream 4389 true Chr10: 4767532-4771920 Glycine max
Glyma.10G052700 2.0kb downstream 2.0kb downstream 2000 false Chr10: 4767532-4769531 Glycine max
Glyma.10G052700 5.0kb upstream 5.0kb upstream 7389 true Chr10: 4769532-4776920 Glycine max
Glyma.10G052700 5.0kb upstream 5.0kb upstream 5000 false Chr10: 4771921-4776920 Glycine max
Glyma.10G052700 5.0kb downstream 5.0kb downstream 7389 true Chr10: 4764532-4771920 Glycine max
Glyma.10G052700 5.0kb downstream 5.0kb downstream 5000 false Chr10: 4764532-4769531 Glycine max
Glyma.10G052700 10.0kb upstream 10.0kb upstream 12389 true Chr10: 4769532-4781920 Glycine max
Glyma.10G052700 10.0kb upstream 10.0kb upstream 10000 false Chr10: 4771921-4781920 Glycine max
Glyma.10G052700 10.0kb downstream 10.0kb downstream 12389 true Chr10: 4759532-4771920 Glycine max
Glyma.10G052700 10.0kb downstream 10.0kb downstream 10000 false Chr10: 4759532-4769531 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041228 5273 Angiosperm View MSA
122310150 5265 Fabidae View MSA
124071685 5270 Rosid View MSA
123752042 5271 Pentapetalae View MSA
122795974 5272 Eudicot View MSA
121344962 5274 Embryophyte View MSA
123424179 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 54.0805 0.0 190.575 High  
cufflinks 41.0143 0.0 121.924 High  
cufflinks 29.8304 0.0 108.899 High  
cufflinks 42.4584 0.0 150.904 High  
cufflinks 78.2278 0.0 292.693 High  
cufflinks 127.949 0.0 526.383 High High
cufflinks 20.8225 0.0 78.3252   Low
cufflinks 67.9995 0.0 245.331 High  
cufflinks 54.5091 0.0 194.092 High  
cufflinks 22.491     High High
cufflinks 5.212       Low
cufflinks 6.066        
cufflinks 25.063     High High
cufflinks 23.829     High High
cufflinks 3.432       Low
cufflinks 10.167     High  
cufflinks 7.428     High  
cufflinks 9.151     High  
cufflinks 9.949     High  
cufflinks 8.428     High  
cufflinks 8.598     High  
cufflinks 10.051     High  
cufflinks 10.548     High  
cufflinks 8.398     High  
cufflinks 9.806     High  
cufflinks 10.886     High  

0 Strain