Gene : Glyma.10G054900 G. max Wm82.a2.v1
Genomic Order:  549 Name:  ? Glyma.10G054900
Secondary Identifier:  ? PAC:30474813
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G054900 0.5kb upstream 0.5kb upstream 3739 true Chr10: 4978175-4981913 Glycine max
Glyma.10G054900 0.5kb upstream 0.5kb upstream 500 false Chr10: 4981414-4981913 Glycine max
Glyma.10G054900 0.5kb downstream 0.5kb downstream 3739 true Chr10: 4977675-4981413 Glycine max
Glyma.10G054900 0.5kb downstream 0.5kb downstream 500 false Chr10: 4977675-4978174 Glycine max
Glyma.10G054900 1.0kb upstream 1.0kb upstream 4239 true Chr10: 4978175-4982413 Glycine max
Glyma.10G054900 1.0kb upstream 1.0kb upstream 1000 false Chr10: 4981414-4982413 Glycine max
Glyma.10G054900 1.0kb downstream 1.0kb downstream 4239 true Chr10: 4977175-4981413 Glycine max
Glyma.10G054900 1.0kb downstream 1.0kb downstream 1000 false Chr10: 4977175-4978174 Glycine max
Glyma.10G054900 2.0kb upstream 2.0kb upstream 5239 true Chr10: 4978175-4983413 Glycine max
Glyma.10G054900 2.0kb upstream 2.0kb upstream 2000 false Chr10: 4981414-4983413 Glycine max
Glyma.10G054900 2.0kb downstream 2.0kb downstream 5239 true Chr10: 4976175-4981413 Glycine max
Glyma.10G054900 2.0kb downstream 2.0kb downstream 2000 false Chr10: 4976175-4978174 Glycine max
Glyma.10G054900 5.0kb upstream 5.0kb upstream 8239 true Chr10: 4978175-4986413 Glycine max
Glyma.10G054900 5.0kb upstream 5.0kb upstream 5000 false Chr10: 4981414-4986413 Glycine max
Glyma.10G054900 5.0kb downstream 5.0kb downstream 8239 true Chr10: 4973175-4981413 Glycine max
Glyma.10G054900 5.0kb downstream 5.0kb downstream 5000 false Chr10: 4973175-4978174 Glycine max
Glyma.10G054900 10.0kb upstream 10.0kb upstream 13239 true Chr10: 4978175-4991413 Glycine max
Glyma.10G054900 10.0kb upstream 10.0kb upstream 10000 false Chr10: 4981414-4991413 Glycine max
Glyma.10G054900 10.0kb downstream 10.0kb downstream 13239 true Chr10: 4968175-4981413 Glycine max
Glyma.10G054900 10.0kb downstream 10.0kb downstream 10000 false Chr10: 4968175-4978174 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305965 5265 Fabidae View MSA
124068486 5270 Rosid View MSA
123739763 5271 Pentapetalae View MSA
122789880 5272 Eudicot View MSA
122047185 5273 Angiosperm View MSA
121347839 5274 Embryophyte View MSA
123423892 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.1467 0.0 84.2883 High High
cufflinks 5.00787 0.0 22.3385    
cufflinks 8.88549 0.0 33.1084    
cufflinks 3.19195 0.0 16.3936    
cufflinks 2.568 0.0 13.8133    
cufflinks 9.67463 0.0 34.9841    
cufflinks 2.64281 0.0 14.5457    
cufflinks 3.06265 0.0 15.9412    
cufflinks 3.21967 0.0 16.7274    
cufflinks 0.458        
cufflinks 0.329        
cufflinks 1.008        
cufflinks 0.321        
cufflinks 0.248       Low
cufflinks 0.188       Low
cufflinks 1.574       High
cufflinks 0.365        
cufflinks 0.686        
cufflinks 0.584        
cufflinks 1.807       High
cufflinks 0.311        
cufflinks 1.745       High
cufflinks 0.724        
cufflinks 0.308        
cufflinks 1.954       High
cufflinks 0.773        

0 Strain