Gene : Glyma.10G055400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12899//PTHR12899:SF4 - 39S RIBOSOMAL PROTEIN L18, MITOCHONDRIAL Genomic Order:  554
Name:  ? Glyma.10G055400 Secondary Identifier:  ? PAC:30473694
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G055400 0.5kb upstream 0.5kb upstream 884 true Chr10: 5062198-5063081 Glycine max
Glyma.10G055400 0.5kb upstream 0.5kb upstream 500 false Chr10: 5062582-5063081 Glycine max
Glyma.10G055400 0.5kb downstream 0.5kb downstream 884 true Chr10: 5061698-5062581 Glycine max
Glyma.10G055400 0.5kb downstream 0.5kb downstream 500 false Chr10: 5061698-5062197 Glycine max
Glyma.10G055400 1.0kb upstream 1.0kb upstream 1384 true Chr10: 5062198-5063581 Glycine max
Glyma.10G055400 1.0kb upstream 1.0kb upstream 1000 false Chr10: 5062582-5063581 Glycine max
Glyma.10G055400 1.0kb downstream 1.0kb downstream 1384 true Chr10: 5061198-5062581 Glycine max
Glyma.10G055400 1.0kb downstream 1.0kb downstream 1000 false Chr10: 5061198-5062197 Glycine max
Glyma.10G055400 2.0kb upstream 2.0kb upstream 2384 true Chr10: 5062198-5064581 Glycine max
Glyma.10G055400 2.0kb upstream 2.0kb upstream 2000 false Chr10: 5062582-5064581 Glycine max
Glyma.10G055400 2.0kb downstream 2.0kb downstream 2384 true Chr10: 5060198-5062581 Glycine max
Glyma.10G055400 2.0kb downstream 2.0kb downstream 2000 false Chr10: 5060198-5062197 Glycine max
Glyma.10G055400 5.0kb upstream 5.0kb upstream 5384 true Chr10: 5062198-5067581 Glycine max
Glyma.10G055400 5.0kb upstream 5.0kb upstream 5000 false Chr10: 5062582-5067581 Glycine max
Glyma.10G055400 5.0kb downstream 5.0kb downstream 5384 true Chr10: 5057198-5062581 Glycine max
Glyma.10G055400 5.0kb downstream 5.0kb downstream 5000 false Chr10: 5057198-5062197 Glycine max
Glyma.10G055400 10.0kb upstream 10.0kb upstream 10384 true Chr10: 5062198-5072581 Glycine max
Glyma.10G055400 10.0kb upstream 10.0kb upstream 10000 false Chr10: 5062582-5072581 Glycine max
Glyma.10G055400 10.0kb downstream 10.0kb downstream 10384 true Chr10: 5052198-5062581 Glycine max
Glyma.10G055400 10.0kb downstream 10.0kb downstream 10000 false Chr10: 5052198-5062197 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309171 5265 Fabidae View MSA
124065867 5270 Rosid View MSA
123736838 5271 Pentapetalae View MSA
122788352 5272 Eudicot View MSA
122047564 5273 Angiosperm View MSA
121310762 5274 Embryophyte View MSA
123348169 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.66016 0.0 9.96285   High
cufflinks 1.77107 0.0 6.77218    
cufflinks 2.23903 0.0 8.47201    
cufflinks 0.614447 0.0 2.44484   Low
cufflinks 0.928436 0.0 3.6157    
cufflinks 2.15584 0.0 8.13778    
cufflinks 2.58108 0.0 9.63473   High
cufflinks 1.05556 0.0 4.12148    
cufflinks 0.936289 0.0 3.66689    
cufflinks 0.417        
cufflinks 0.694        
cufflinks 0.704        
cufflinks 0.791        
cufflinks 1.202       High
cufflinks 0.297       Low
cufflinks 0.566        
cufflinks 0.209       Low
cufflinks 0.925        
cufflinks 0.859        
cufflinks 0.449        
cufflinks 0.319       Low
cufflinks 0.678        
cufflinks 1.28       High
cufflinks 0.39        
cufflinks 0.689        
cufflinks 0.632        

0 Strain