Gene : Glyma.10G056700 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR35514:SF1 - THYLAKOID LUMENAL 15.0 KDA PROTEIN 2, CHLOROPLASTIC Genomic Order:  567
Name:  ? Glyma.10G056700 Secondary Identifier:  ? PAC:30476737
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G056700 0.5kb upstream 0.5kb upstream 5036 true Chr10: 5172921-5177956 Glycine max
Glyma.10G056700 0.5kb upstream 0.5kb upstream 500 false Chr10: 5177457-5177956 Glycine max
Glyma.10G056700 0.5kb downstream 0.5kb downstream 5036 true Chr10: 5172421-5177456 Glycine max
Glyma.10G056700 0.5kb downstream 0.5kb downstream 500 false Chr10: 5172421-5172920 Glycine max
Glyma.10G056700 1.0kb upstream 1.0kb upstream 5536 true Chr10: 5172921-5178456 Glycine max
Glyma.10G056700 1.0kb upstream 1.0kb upstream 1000 false Chr10: 5177457-5178456 Glycine max
Glyma.10G056700 1.0kb downstream 1.0kb downstream 5536 true Chr10: 5171921-5177456 Glycine max
Glyma.10G056700 1.0kb downstream 1.0kb downstream 1000 false Chr10: 5171921-5172920 Glycine max
Glyma.10G056700 2.0kb upstream 2.0kb upstream 6536 true Chr10: 5172921-5179456 Glycine max
Glyma.10G056700 2.0kb upstream 2.0kb upstream 2000 false Chr10: 5177457-5179456 Glycine max
Glyma.10G056700 2.0kb downstream 2.0kb downstream 6536 true Chr10: 5170921-5177456 Glycine max
Glyma.10G056700 2.0kb downstream 2.0kb downstream 2000 false Chr10: 5170921-5172920 Glycine max
Glyma.10G056700 5.0kb upstream 5.0kb upstream 9536 true Chr10: 5172921-5182456 Glycine max
Glyma.10G056700 5.0kb upstream 5.0kb upstream 5000 false Chr10: 5177457-5182456 Glycine max
Glyma.10G056700 5.0kb downstream 5.0kb downstream 9536 true Chr10: 5167921-5177456 Glycine max
Glyma.10G056700 5.0kb downstream 5.0kb downstream 5000 false Chr10: 5167921-5172920 Glycine max
Glyma.10G056700 10.0kb upstream 10.0kb upstream 14536 true Chr10: 5172921-5187456 Glycine max
Glyma.10G056700 10.0kb upstream 10.0kb upstream 10000 false Chr10: 5177457-5187456 Glycine max
Glyma.10G056700 10.0kb downstream 10.0kb downstream 14536 true Chr10: 5162921-5177456 Glycine max
Glyma.10G056700 10.0kb downstream 10.0kb downstream 10000 false Chr10: 5162921-5172920 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299597 5265 Fabidae View MSA
124066253 5270 Rosid View MSA
123749452 5271 Pentapetalae View MSA
122788666 5272 Eudicot View MSA
122051168 5273 Angiosperm View MSA
121346154 5274 Embryophyte View MSA
123424497 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.58888 0.0 4.86747    
cufflinks 2.19094 0.0 6.42803   High
cufflinks 1.0731 0.0 3.46098    
cufflinks 1.5748 0.0 4.82626    
cufflinks 1.10217 0.0 3.56165    
cufflinks 0.397 0.0 1.42401   Low
cufflinks 1.22887 0.0 3.91677    
cufflinks 1.38084 0.0 4.32051    
cufflinks 0.992913 0.0 3.25416    
cufflinks 1.382        
cufflinks 0.838        
cufflinks 1.758        
cufflinks 0.658        
cufflinks 0.843        
cufflinks 0.995        
cufflinks 4.546       High
cufflinks 0.301       Low
cufflinks 2.191        
cufflinks 1.897        
cufflinks 5.848       High
cufflinks 0.771        
cufflinks 4.698       High
cufflinks 3.985       High
cufflinks 0.52       Low
cufflinks 4.982       High
cufflinks 0.621        

0 Strain