Gene : Glyma.10G057800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR21717:SF21 - PROTEIN TRF-LIKE 8 Genomic Order:  578
Name:  ? Glyma.10G057800 Secondary Identifier:  ? PAC:30475210
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G057800 0.5kb upstream 0.5kb upstream 6635 true Chr10: 5295786-5302420 Glycine max
Glyma.10G057800 0.5kb upstream 0.5kb upstream 500 false Chr10: 5295786-5296285 Glycine max
Glyma.10G057800 0.5kb downstream 0.5kb downstream 6635 true Chr10: 5296286-5302920 Glycine max
Glyma.10G057800 0.5kb downstream 0.5kb downstream 500 false Chr10: 5302421-5302920 Glycine max
Glyma.10G057800 1.0kb upstream 1.0kb upstream 7135 true Chr10: 5295286-5302420 Glycine max
Glyma.10G057800 1.0kb upstream 1.0kb upstream 1000 false Chr10: 5295286-5296285 Glycine max
Glyma.10G057800 1.0kb downstream 1.0kb downstream 7135 true Chr10: 5296286-5303420 Glycine max
Glyma.10G057800 1.0kb downstream 1.0kb downstream 1000 false Chr10: 5302421-5303420 Glycine max
Glyma.10G057800 2.0kb upstream 2.0kb upstream 8135 true Chr10: 5294286-5302420 Glycine max
Glyma.10G057800 2.0kb upstream 2.0kb upstream 2000 false Chr10: 5294286-5296285 Glycine max
Glyma.10G057800 2.0kb downstream 2.0kb downstream 8135 true Chr10: 5296286-5304420 Glycine max
Glyma.10G057800 2.0kb downstream 2.0kb downstream 2000 false Chr10: 5302421-5304420 Glycine max
Glyma.10G057800 5.0kb upstream 5.0kb upstream 11135 true Chr10: 5291286-5302420 Glycine max
Glyma.10G057800 5.0kb upstream 5.0kb upstream 5000 false Chr10: 5291286-5296285 Glycine max
Glyma.10G057800 5.0kb downstream 5.0kb downstream 11135 true Chr10: 5296286-5307420 Glycine max
Glyma.10G057800 5.0kb downstream 5.0kb downstream 5000 false Chr10: 5302421-5307420 Glycine max
Glyma.10G057800 10.0kb upstream 10.0kb upstream 16135 true Chr10: 5286286-5302420 Glycine max
Glyma.10G057800 10.0kb upstream 10.0kb upstream 10000 false Chr10: 5286286-5296285 Glycine max
Glyma.10G057800 10.0kb downstream 10.0kb downstream 16135 true Chr10: 5296286-5312420 Glycine max
Glyma.10G057800 10.0kb downstream 10.0kb downstream 10000 false Chr10: 5302421-5312420 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307792 5265 Fabidae View MSA
124070944 5270 Rosid View MSA
123748062 5271 Pentapetalae View MSA
122796480 5272 Eudicot View MSA
122050200 5273 Angiosperm View MSA
123429070 5275 Viridiplantae View MSA
121311795 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.9872 0.0 38.2267   High
cufflinks 4.3813 0.0 15.5539   Low
cufflinks 5.37573 0.0 18.0298   Low
cufflinks 7.14923 0.0 26.799    
cufflinks 6.65089 0.0 21.6168    
cufflinks 7.65558 0.0 24.1491    
cufflinks 11.1507 0.0 38.5061   High
cufflinks 7.22983 0.0 22.8957    
cufflinks 12.2475 0.0 41.6312   High
cufflinks 2.255        
cufflinks 4.847        
cufflinks 1.258        
cufflinks 1.381        
cufflinks 0.918       Low
cufflinks 9.73     High High
cufflinks 1.017        
cufflinks 8.294     High High
cufflinks 1.384        
cufflinks 1.205        
cufflinks 1.035        
cufflinks 5.677       High
cufflinks 1.097        
cufflinks 2.116        
cufflinks 3.364        
cufflinks 0.998        
cufflinks 7.992     High High

0 Strain