Gene : Glyma.10G058100 G. max Wm82.a2.v1
Defline:  (1 of 6) 1.1.1.41 - Isocitrate dehydrogenase (NAD(+)) / Nicotinamide adenine dinucleotide isocitrate dehydrogenase Genomic Order:  581
Name:  ? Glyma.10G058100 Secondary Identifier:  ? PAC:30474137
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax BRANCHED-CHAIN-AA-SYN-PWY Glycine max pathologic  
Gmax LEUSYN-PWY Glycine max pathologic  
Gmax PWY-5464 Glycine max pathologic  
Gmax PWY-5690 Glycine max pathologic  
Gmax PWY-6549 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G058100 0.5kb upstream 0.5kb upstream 5507 true Chr10: 5319912-5325418 Glycine max
Glyma.10G058100 0.5kb upstream 0.5kb upstream 500 false Chr10: 5324919-5325418 Glycine max
Glyma.10G058100 0.5kb downstream 0.5kb downstream 5507 true Chr10: 5319412-5324918 Glycine max
Glyma.10G058100 0.5kb downstream 0.5kb downstream 500 false Chr10: 5319412-5319911 Glycine max
Glyma.10G058100 1.0kb upstream 1.0kb upstream 6007 true Chr10: 5319912-5325918 Glycine max
Glyma.10G058100 1.0kb upstream 1.0kb upstream 1000 false Chr10: 5324919-5325918 Glycine max
Glyma.10G058100 1.0kb downstream 1.0kb downstream 6007 true Chr10: 5318912-5324918 Glycine max
Glyma.10G058100 1.0kb downstream 1.0kb downstream 1000 false Chr10: 5318912-5319911 Glycine max
Glyma.10G058100 2.0kb upstream 2.0kb upstream 7007 true Chr10: 5319912-5326918 Glycine max
Glyma.10G058100 2.0kb upstream 2.0kb upstream 2000 false Chr10: 5324919-5326918 Glycine max
Glyma.10G058100 2.0kb downstream 2.0kb downstream 7007 true Chr10: 5317912-5324918 Glycine max
Glyma.10G058100 2.0kb downstream 2.0kb downstream 2000 false Chr10: 5317912-5319911 Glycine max
Glyma.10G058100 5.0kb upstream 5.0kb upstream 10007 true Chr10: 5319912-5329918 Glycine max
Glyma.10G058100 5.0kb upstream 5.0kb upstream 5000 false Chr10: 5324919-5329918 Glycine max
Glyma.10G058100 5.0kb downstream 5.0kb downstream 10007 true Chr10: 5314912-5324918 Glycine max
Glyma.10G058100 5.0kb downstream 5.0kb downstream 5000 false Chr10: 5314912-5319911 Glycine max
Glyma.10G058100 10.0kb upstream 10.0kb upstream 15007 true Chr10: 5319912-5334918 Glycine max
Glyma.10G058100 10.0kb upstream 10.0kb upstream 10000 false Chr10: 5324919-5334918 Glycine max
Glyma.10G058100 10.0kb downstream 10.0kb downstream 15007 true Chr10: 5309912-5324918 Glycine max
Glyma.10G058100 10.0kb downstream 10.0kb downstream 10000 false Chr10: 5309912-5319911 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302631 5265 Fabidae View MSA
124066571 5270 Rosid View MSA
123739712 5271 Pentapetalae View MSA
122792664 5272 Eudicot View MSA
122041698 5273 Angiosperm View MSA
121349734 5274 Embryophyte View MSA
123425496 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 87.8747 0.0 355.096 High High
cufflinks 32.0433 0.0 114.384 High Low
cufflinks 55.367 0.0 223.694 High  
cufflinks 35.8029 0.0 131.447 High  
cufflinks 51.7034 0.0 205.201 High  
cufflinks 69.5653 0.0 301.55 High High
cufflinks 29.0186 0.0 89.155 High Low
cufflinks 53.0025 0.0 211.661 High  
cufflinks 47.374 0.0 185.689 High  
cufflinks 10.19     High High
cufflinks 6.76     High  
cufflinks 8.266     High  
cufflinks 12.745     High High
cufflinks 11.645     High High
cufflinks 6.665     High  
cufflinks 5.08       Low
cufflinks 8.281     High  
cufflinks 8.412     High  
cufflinks 6.212        
cufflinks 4.986       Low
cufflinks 7.726     High  
cufflinks 5.518        
cufflinks 5.868        
cufflinks 9.407     High  
cufflinks 4.621       Low
cufflinks 8.521     High  

0 Strain