Gene : Glyma.10G058200 G. max Wm82.a2.v1
Defline:  (1 of 8) PTHR10362 - HISTIDINE AMMONIA-LYASE Genomic Order:  582
Name:  ? Glyma.10G058200 Secondary Identifier:  ? PAC:30474148
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-1121 Glycine max pathologic  
Gmax PWY1F-467 Glycine max pathologic  
Gmax PWY-7186 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G058200 0.5kb upstream 0.5kb upstream 5039 true Chr10: 5328963-5334001 Glycine max
Glyma.10G058200 0.5kb upstream 0.5kb upstream 500 false Chr10: 5333502-5334001 Glycine max
Glyma.10G058200 0.5kb downstream 0.5kb downstream 5039 true Chr10: 5328463-5333501 Glycine max
Glyma.10G058200 0.5kb downstream 0.5kb downstream 500 false Chr10: 5328463-5328962 Glycine max
Glyma.10G058200 1.0kb upstream 1.0kb upstream 5539 true Chr10: 5328963-5334501 Glycine max
Glyma.10G058200 1.0kb upstream 1.0kb upstream 1000 false Chr10: 5333502-5334501 Glycine max
Glyma.10G058200 1.0kb downstream 1.0kb downstream 5539 true Chr10: 5327963-5333501 Glycine max
Glyma.10G058200 1.0kb downstream 1.0kb downstream 1000 false Chr10: 5327963-5328962 Glycine max
Glyma.10G058200 2.0kb upstream 2.0kb upstream 6539 true Chr10: 5328963-5335501 Glycine max
Glyma.10G058200 2.0kb upstream 2.0kb upstream 2000 false Chr10: 5333502-5335501 Glycine max
Glyma.10G058200 2.0kb downstream 2.0kb downstream 6539 true Chr10: 5326963-5333501 Glycine max
Glyma.10G058200 2.0kb downstream 2.0kb downstream 2000 false Chr10: 5326963-5328962 Glycine max
Glyma.10G058200 5.0kb upstream 5.0kb upstream 9539 true Chr10: 5328963-5338501 Glycine max
Glyma.10G058200 5.0kb upstream 5.0kb upstream 5000 false Chr10: 5333502-5338501 Glycine max
Glyma.10G058200 5.0kb downstream 5.0kb downstream 9539 true Chr10: 5323963-5333501 Glycine max
Glyma.10G058200 5.0kb downstream 5.0kb downstream 5000 false Chr10: 5323963-5328962 Glycine max
Glyma.10G058200 10.0kb upstream 10.0kb upstream 14539 true Chr10: 5328963-5343501 Glycine max
Glyma.10G058200 10.0kb upstream 10.0kb upstream 10000 false Chr10: 5333502-5343501 Glycine max
Glyma.10G058200 10.0kb downstream 10.0kb downstream 14539 true Chr10: 5318963-5333501 Glycine max
Glyma.10G058200 10.0kb downstream 10.0kb downstream 10000 false Chr10: 5318963-5328962 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311537 5265 Fabidae View MSA
124070450 5270 Rosid View MSA
123747775 5271 Pentapetalae View MSA
122795347 5272 Eudicot View MSA
122043246 5273 Angiosperm View MSA
121351477 5274 Embryophyte View MSA
123382181 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 438.197 0.0 2523.29 High High
cufflinks 113.66 0.0 406.756 High  
cufflinks 57.8643 0.0 179.619 High Low
cufflinks 153.767 0.0 601.367 High  
cufflinks 143.015 0.0 548.011 High  
cufflinks 402.751 0.0 2243.73 High High
cufflinks 50.8792 0.0 155.005 High Low
cufflinks 181.864 0.0 755.027 High  
cufflinks 116.384 0.0 421.091 High  
cufflinks 81.506     High  
cufflinks 15.085     High Low
cufflinks 24.111     High Low
cufflinks 66.587     High  
cufflinks 37.767     High  
cufflinks 14.72     High Low
cufflinks 101.063     High  
cufflinks 57.872     High  
cufflinks 49.947     High  
cufflinks 115.545     High High
cufflinks 100.109     High  
cufflinks 26.771     High  
cufflinks 133.384     High High
cufflinks 141.713     High High
cufflinks 44.629     High  
cufflinks 101.888     High  
cufflinks 42.829     High  

0 Strain