Gene : Glyma.10G114500 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR15672:SF15 - EXPRESSED PROTEIN Genomic Order:  1145
Name:  ? Glyma.10G114500 Secondary Identifier:  ? PAC:30474108
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G114500 0.5kb upstream 0.5kb upstream 1118 true Chr10: 28601982-28603099 Glycine max
Glyma.10G114500 0.5kb upstream 0.5kb upstream 500 false Chr10: 28602600-28603099 Glycine max
Glyma.10G114500 0.5kb downstream 0.5kb downstream 1118 true Chr10: 28601482-28602599 Glycine max
Glyma.10G114500 0.5kb downstream 0.5kb downstream 500 false Chr10: 28601482-28601981 Glycine max
Glyma.10G114500 1.0kb upstream 1.0kb upstream 1618 true Chr10: 28601982-28603599 Glycine max
Glyma.10G114500 1.0kb upstream 1.0kb upstream 1000 false Chr10: 28602600-28603599 Glycine max
Glyma.10G114500 1.0kb downstream 1.0kb downstream 1618 true Chr10: 28600982-28602599 Glycine max
Glyma.10G114500 1.0kb downstream 1.0kb downstream 1000 false Chr10: 28600982-28601981 Glycine max
Glyma.10G114500 2.0kb upstream 2.0kb upstream 2618 true Chr10: 28601982-28604599 Glycine max
Glyma.10G114500 2.0kb upstream 2.0kb upstream 2000 false Chr10: 28602600-28604599 Glycine max
Glyma.10G114500 2.0kb downstream 2.0kb downstream 2618 true Chr10: 28599982-28602599 Glycine max
Glyma.10G114500 2.0kb downstream 2.0kb downstream 2000 false Chr10: 28599982-28601981 Glycine max
Glyma.10G114500 5.0kb upstream 5.0kb upstream 5618 true Chr10: 28601982-28607599 Glycine max
Glyma.10G114500 5.0kb upstream 5.0kb upstream 5000 false Chr10: 28602600-28607599 Glycine max
Glyma.10G114500 5.0kb downstream 5.0kb downstream 5618 true Chr10: 28596982-28602599 Glycine max
Glyma.10G114500 5.0kb downstream 5.0kb downstream 5000 false Chr10: 28596982-28601981 Glycine max
Glyma.10G114500 10.0kb upstream 10.0kb upstream 10618 true Chr10: 28601982-28612599 Glycine max
Glyma.10G114500 10.0kb upstream 10.0kb upstream 10000 false Chr10: 28602600-28612599 Glycine max
Glyma.10G114500 10.0kb downstream 10.0kb downstream 10618 true Chr10: 28591982-28602599 Glycine max
Glyma.10G114500 10.0kb downstream 10.0kb downstream 10000 false Chr10: 28591982-28601981 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122244609 5265 Fabidae Singleton cluster - no MSA
124041327 5270 Rosid View MSA
123753124 5271 Pentapetalae View MSA
122794713 5272 Eudicot View MSA
122048574 5273 Angiosperm View MSA
123428874 5275 Viridiplantae View MSA
121347562 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0221904 0.0 0.107891 Low Low
cufflinks 0.0591958 0.0 0.261309 Low  
cufflinks 0.209309 0.0 0.845468 Low High
cufflinks 0.0958393 0.0 0.405944 Low  
cufflinks 0.0173706 0.0 0.0867156 Low Low
cufflinks 0.279786 0.0 1.11881 Low High
cufflinks 0.0576894 0.0 0.25523 Low  
cufflinks 0.0832884 0.0 0.356569 Low  
cufflinks 0.0801489 0.0 0.344513 Low  
cufflinks 0.359        
cufflinks 1.437       High
cufflinks 0.401        
cufflinks 0.08     Low Low
cufflinks 0.207       Low
cufflinks 0.82        
cufflinks 0.528        
cufflinks 0.403        
cufflinks 0.406        
cufflinks 0.42        
cufflinks 0.995        
cufflinks 0.958        
cufflinks 0.579        
cufflinks 0.317        
cufflinks 0.998        
cufflinks 0.73        
cufflinks 0.711        

0 Strain