Gene : Glyma.10G116100 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR23421:SF51 - BETA-GALACTOSIDASE 5 Genomic Order:  1161
Name:  ? Glyma.10G116100 Secondary Identifier:  ? PAC:30477461
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G116100 0.5kb upstream 0.5kb upstream 1629 true Chr10: 28889639-28891267 Glycine max
Glyma.10G116100 0.5kb upstream 0.5kb upstream 500 false Chr10: 28890768-28891267 Glycine max
Glyma.10G116100 0.5kb downstream 0.5kb downstream 1629 true Chr10: 28889139-28890767 Glycine max
Glyma.10G116100 0.5kb downstream 0.5kb downstream 500 false Chr10: 28889139-28889638 Glycine max
Glyma.10G116100 1.0kb upstream 1.0kb upstream 2129 true Chr10: 28889639-28891767 Glycine max
Glyma.10G116100 1.0kb upstream 1.0kb upstream 1000 false Chr10: 28890768-28891767 Glycine max
Glyma.10G116100 1.0kb downstream 1.0kb downstream 2129 true Chr10: 28888639-28890767 Glycine max
Glyma.10G116100 1.0kb downstream 1.0kb downstream 1000 false Chr10: 28888639-28889638 Glycine max
Glyma.10G116100 2.0kb upstream 2.0kb upstream 3129 true Chr10: 28889639-28892767 Glycine max
Glyma.10G116100 2.0kb upstream 2.0kb upstream 2000 false Chr10: 28890768-28892767 Glycine max
Glyma.10G116100 2.0kb downstream 2.0kb downstream 3129 true Chr10: 28887639-28890767 Glycine max
Glyma.10G116100 2.0kb downstream 2.0kb downstream 2000 false Chr10: 28887639-28889638 Glycine max
Glyma.10G116100 5.0kb upstream 5.0kb upstream 6129 true Chr10: 28889639-28895767 Glycine max
Glyma.10G116100 5.0kb upstream 5.0kb upstream 5000 false Chr10: 28890768-28895767 Glycine max
Glyma.10G116100 5.0kb downstream 5.0kb downstream 6129 true Chr10: 28884639-28890767 Glycine max
Glyma.10G116100 5.0kb downstream 5.0kb downstream 5000 false Chr10: 28884639-28889638 Glycine max
Glyma.10G116100 10.0kb upstream 10.0kb upstream 11129 true Chr10: 28889639-28900767 Glycine max
Glyma.10G116100 10.0kb upstream 10.0kb upstream 10000 false Chr10: 28890768-28900767 Glycine max
Glyma.10G116100 10.0kb downstream 10.0kb downstream 11129 true Chr10: 28879639-28890767 Glycine max
Glyma.10G116100 10.0kb downstream 10.0kb downstream 10000 false Chr10: 28879639-28889638 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121609817 5273 Angiosperm Singleton cluster - no MSA
122242205 5265 Fabidae Singleton cluster - no MSA
123986938 5270 Rosid Singleton cluster - no MSA
123562250 5271 Pentapetalae Singleton cluster - no MSA
122597037 5272 Eudicot Singleton cluster - no MSA
120882064 5274 Embryophyte Singleton cluster - no MSA
122922908 5275 Viridiplantae Singleton cluster - no MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0282472 0.0 0.154325 Low  
cufflinks 0.696302 0.0 4.80539   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.110967 0.0 0.461453 Low  
cufflinks 0.007     Low Low
cufflinks 0.015     Low  
cufflinks 0.013     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.011     Low  
cufflinks 0.008     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.012     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.011     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.008     Low  
cufflinks 0.008     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.022     Low High

0 Strain