Gene : Glyma.10G116500 G. max Wm82.a2.v1
Defline:  (1 of 3) KOG2861 - Uncharacterized conserved protein Genomic Order:  1165
Name:  ? Glyma.10G116500 Secondary Identifier:  ? PAC:30476984
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G116500 0.5kb upstream 0.5kb upstream 28835 true Chr10: 28912687-28941521 Glycine max
Glyma.10G116500 0.5kb upstream 0.5kb upstream 500 false Chr10: 28941022-28941521 Glycine max
Glyma.10G116500 0.5kb downstream 0.5kb downstream 28835 true Chr10: 28912187-28941021 Glycine max
Glyma.10G116500 0.5kb downstream 0.5kb downstream 500 false Chr10: 28912187-28912686 Glycine max
Glyma.10G116500 1.0kb upstream 1.0kb upstream 29335 true Chr10: 28912687-28942021 Glycine max
Glyma.10G116500 1.0kb upstream 1.0kb upstream 1000 false Chr10: 28941022-28942021 Glycine max
Glyma.10G116500 1.0kb downstream 1.0kb downstream 29335 true Chr10: 28911687-28941021 Glycine max
Glyma.10G116500 1.0kb downstream 1.0kb downstream 1000 false Chr10: 28911687-28912686 Glycine max
Glyma.10G116500 2.0kb upstream 2.0kb upstream 30335 true Chr10: 28912687-28943021 Glycine max
Glyma.10G116500 2.0kb upstream 2.0kb upstream 2000 false Chr10: 28941022-28943021 Glycine max
Glyma.10G116500 2.0kb downstream 2.0kb downstream 30335 true Chr10: 28910687-28941021 Glycine max
Glyma.10G116500 2.0kb downstream 2.0kb downstream 2000 false Chr10: 28910687-28912686 Glycine max
Glyma.10G116500 5.0kb upstream 5.0kb upstream 33335 true Chr10: 28912687-28946021 Glycine max
Glyma.10G116500 5.0kb upstream 5.0kb upstream 5000 false Chr10: 28941022-28946021 Glycine max
Glyma.10G116500 5.0kb downstream 5.0kb downstream 33335 true Chr10: 28907687-28941021 Glycine max
Glyma.10G116500 5.0kb downstream 5.0kb downstream 5000 false Chr10: 28907687-28912686 Glycine max
Glyma.10G116500 10.0kb upstream 10.0kb upstream 38335 true Chr10: 28912687-28951021 Glycine max
Glyma.10G116500 10.0kb upstream 10.0kb upstream 10000 false Chr10: 28941022-28951021 Glycine max
Glyma.10G116500 10.0kb downstream 10.0kb downstream 38335 true Chr10: 28902687-28941021 Glycine max
Glyma.10G116500 10.0kb downstream 10.0kb downstream 10000 false Chr10: 28902687-28912686 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306427 5265 Fabidae View MSA
124062453 5270 Rosid View MSA
123738616 5271 Pentapetalae View MSA
122789253 5272 Eudicot View MSA
122049047 5273 Angiosperm View MSA
121345242 5274 Embryophyte View MSA
123425933 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.99102 0.0 33.1319   High
cufflinks 6.21706 0.0 27.3093    
cufflinks 4.68967 0.0 18.9414   Low
cufflinks 5.61715 0.0 26.3114    
cufflinks 5.51522 0.0 21.1632    
cufflinks 5.31155 0.0 20.1637    
cufflinks 5.87555 0.0 25.037    
cufflinks 7.52388 0.0 26.7103    
cufflinks 4.8006 0.0 19.0465    
cufflinks 0.092     Low  
cufflinks 0.048     Low Low
cufflinks 0.062     Low  
cufflinks 0.068     Low  
cufflinks 0.077        
cufflinks 0.075        
cufflinks 0.119       High
cufflinks 0.072        
cufflinks 0.082     Low  
cufflinks 0.098     Low  
cufflinks 0.132       High
cufflinks 0.061     Low  
cufflinks 0.115        
cufflinks 0.141       High
cufflinks 0.055     Low Low
cufflinks 0.126       High
cufflinks 0.061     Low  

0 Strain