Gene : Glyma.10G117200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12599//PTHR12599:SF8 - PTERIN-4-ALPHA-CARBINOLAMINE DEHYDRATASE Genomic Order:  1172
Name:  ? Glyma.10G117200 Secondary Identifier:  ? PAC:30478159
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G117200 0.5kb upstream 0.5kb upstream 4326 true Chr10: 29476408-29480733 Glycine max
Glyma.10G117200 0.5kb upstream 0.5kb upstream 500 false Chr10: 29480234-29480733 Glycine max
Glyma.10G117200 0.5kb downstream 0.5kb downstream 4326 true Chr10: 29475908-29480233 Glycine max
Glyma.10G117200 0.5kb downstream 0.5kb downstream 500 false Chr10: 29475908-29476407 Glycine max
Glyma.10G117200 1.0kb upstream 1.0kb upstream 4826 true Chr10: 29476408-29481233 Glycine max
Glyma.10G117200 1.0kb upstream 1.0kb upstream 1000 false Chr10: 29480234-29481233 Glycine max
Glyma.10G117200 1.0kb downstream 1.0kb downstream 4826 true Chr10: 29475408-29480233 Glycine max
Glyma.10G117200 1.0kb downstream 1.0kb downstream 1000 false Chr10: 29475408-29476407 Glycine max
Glyma.10G117200 2.0kb upstream 2.0kb upstream 5826 true Chr10: 29476408-29482233 Glycine max
Glyma.10G117200 2.0kb upstream 2.0kb upstream 2000 false Chr10: 29480234-29482233 Glycine max
Glyma.10G117200 2.0kb downstream 2.0kb downstream 5826 true Chr10: 29474408-29480233 Glycine max
Glyma.10G117200 2.0kb downstream 2.0kb downstream 2000 false Chr10: 29474408-29476407 Glycine max
Glyma.10G117200 5.0kb upstream 5.0kb upstream 8826 true Chr10: 29476408-29485233 Glycine max
Glyma.10G117200 5.0kb upstream 5.0kb upstream 5000 false Chr10: 29480234-29485233 Glycine max
Glyma.10G117200 5.0kb downstream 5.0kb downstream 8826 true Chr10: 29471408-29480233 Glycine max
Glyma.10G117200 5.0kb downstream 5.0kb downstream 5000 false Chr10: 29471408-29476407 Glycine max
Glyma.10G117200 10.0kb upstream 10.0kb upstream 13826 true Chr10: 29476408-29490233 Glycine max
Glyma.10G117200 10.0kb upstream 10.0kb upstream 10000 false Chr10: 29480234-29490233 Glycine max
Glyma.10G117200 10.0kb downstream 10.0kb downstream 13826 true Chr10: 29466408-29480233 Glycine max
Glyma.10G117200 10.0kb downstream 10.0kb downstream 10000 false Chr10: 29466408-29476407 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310409 5265 Fabidae View MSA
124062939 5270 Rosid View MSA
123742816 5271 Pentapetalae View MSA
122797926 5272 Eudicot View MSA
122046446 5273 Angiosperm View MSA
121348467 5274 Embryophyte View MSA
123427509 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 50.7035 0.0 136.98 High High
cufflinks 5.77022 0.0 17.641    
cufflinks 2.05117 0.0 7.15375    
cufflinks 2.83891 0.0 9.56212    
cufflinks 2.54199 0.0 8.66014    
cufflinks 3.93823 0.0 12.7027    
cufflinks 1.69613 0.0 5.99286    
cufflinks 2.73516 0.0 9.25245    
cufflinks 2.59113 0.0 8.8099    
cufflinks 1.298        
cufflinks 0.332        
cufflinks 0.564        
cufflinks 0.618        
cufflinks 0.348        
cufflinks 0.31        
cufflinks 5.341       High
cufflinks 0.661        
cufflinks 0.604        
cufflinks 1.412        
cufflinks 3.248       High
cufflinks 0.236       Low
cufflinks 3.981       High
cufflinks 5.487       High
cufflinks 0.255       Low
cufflinks 5.417       High
cufflinks 0.455        

0 Strain