Gene : Glyma.10G110600 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR33159:SF3 - RPM1-INTERACTING PROTEIN 4-LIKE PROTEIN Genomic Order:  1106
Name:  ? Glyma.10G110600 Secondary Identifier:  ? PAC:30478211
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G110600 0.5kb upstream 0.5kb upstream 2406 true Chr10: 25733261-25735666 Glycine max
Glyma.10G110600 0.5kb upstream 0.5kb upstream 500 false Chr10: 25733261-25733760 Glycine max
Glyma.10G110600 0.5kb downstream 0.5kb downstream 2406 true Chr10: 25733761-25736166 Glycine max
Glyma.10G110600 0.5kb downstream 0.5kb downstream 500 false Chr10: 25735667-25736166 Glycine max
Glyma.10G110600 1.0kb upstream 1.0kb upstream 2906 true Chr10: 25732761-25735666 Glycine max
Glyma.10G110600 1.0kb upstream 1.0kb upstream 1000 false Chr10: 25732761-25733760 Glycine max
Glyma.10G110600 1.0kb downstream 1.0kb downstream 2906 true Chr10: 25733761-25736666 Glycine max
Glyma.10G110600 1.0kb downstream 1.0kb downstream 1000 false Chr10: 25735667-25736666 Glycine max
Glyma.10G110600 2.0kb upstream 2.0kb upstream 3906 true Chr10: 25731761-25735666 Glycine max
Glyma.10G110600 2.0kb upstream 2.0kb upstream 2000 false Chr10: 25731761-25733760 Glycine max
Glyma.10G110600 2.0kb downstream 2.0kb downstream 3906 true Chr10: 25733761-25737666 Glycine max
Glyma.10G110600 2.0kb downstream 2.0kb downstream 2000 false Chr10: 25735667-25737666 Glycine max
Glyma.10G110600 5.0kb upstream 5.0kb upstream 6906 true Chr10: 25728761-25735666 Glycine max
Glyma.10G110600 5.0kb upstream 5.0kb upstream 5000 false Chr10: 25728761-25733760 Glycine max
Glyma.10G110600 5.0kb downstream 5.0kb downstream 6906 true Chr10: 25733761-25740666 Glycine max
Glyma.10G110600 5.0kb downstream 5.0kb downstream 5000 false Chr10: 25735667-25740666 Glycine max
Glyma.10G110600 10.0kb upstream 10.0kb upstream 11906 true Chr10: 25723761-25735666 Glycine max
Glyma.10G110600 10.0kb upstream 10.0kb upstream 10000 false Chr10: 25723761-25733760 Glycine max
Glyma.10G110600 10.0kb downstream 10.0kb downstream 11906 true Chr10: 25733761-25745666 Glycine max
Glyma.10G110600 10.0kb downstream 10.0kb downstream 10000 false Chr10: 25735667-25745666 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122250551 5265 Fabidae View MSA
124074284 5270 Rosid View MSA
123751462 5271 Pentapetalae View MSA
122795351 5272 Eudicot View MSA
122048962 5273 Angiosperm View MSA
121311190 5274 Embryophyte View MSA
123348519 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.274352 0.0 1.22901   High
cufflinks 3.08576E-4 0.0 0.017067 Low  
cufflinks 0.146416 0.0 0.69273 Low High
cufflinks 0.127117 0.0 0.609773 Low High
cufflinks 1.63776E-4 0.0 0.0116527 Low Low
cufflinks 0.00150901 0.0 0.0389028 Low  
cufflinks 0.0023328 0.0 0.0464408 Low  
cufflinks 1.02153E-4 0.0 0.00932861 Low Low
cufflinks 0.00138554 0.0 0.0355587 Low  
cufflinks 0.008     Low  
cufflinks 0.01     Low  
cufflinks 0.009     Low  
cufflinks 0.018     Low High
cufflinks 0.006     Low Low
cufflinks 0.011     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.016     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.009     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.008     Low  
cufflinks 0.013     Low  

0 Strain