Gene : Glyma.10G112000 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR22814:SF73 - COPPER TRANSPORT PROTEIN CCH Genomic Order:  1120
Name:  ? Glyma.10G112000 Secondary Identifier:  ? PAC:30477517
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G112000 0.5kb upstream 0.5kb upstream 4459 true Chr10: 26763375-26767833 Glycine max
Glyma.10G112000 0.5kb upstream 0.5kb upstream 500 false Chr10: 26763375-26763874 Glycine max
Glyma.10G112000 0.5kb downstream 0.5kb downstream 4459 true Chr10: 26763875-26768333 Glycine max
Glyma.10G112000 0.5kb downstream 0.5kb downstream 500 false Chr10: 26767834-26768333 Glycine max
Glyma.10G112000 1.0kb upstream 1.0kb upstream 4959 true Chr10: 26762875-26767833 Glycine max
Glyma.10G112000 1.0kb upstream 1.0kb upstream 1000 false Chr10: 26762875-26763874 Glycine max
Glyma.10G112000 1.0kb downstream 1.0kb downstream 4959 true Chr10: 26763875-26768833 Glycine max
Glyma.10G112000 1.0kb downstream 1.0kb downstream 1000 false Chr10: 26767834-26768833 Glycine max
Glyma.10G112000 2.0kb upstream 2.0kb upstream 5959 true Chr10: 26761875-26767833 Glycine max
Glyma.10G112000 2.0kb upstream 2.0kb upstream 2000 false Chr10: 26761875-26763874 Glycine max
Glyma.10G112000 2.0kb downstream 2.0kb downstream 5959 true Chr10: 26763875-26769833 Glycine max
Glyma.10G112000 2.0kb downstream 2.0kb downstream 2000 false Chr10: 26767834-26769833 Glycine max
Glyma.10G112000 5.0kb upstream 5.0kb upstream 8959 true Chr10: 26758875-26767833 Glycine max
Glyma.10G112000 5.0kb upstream 5.0kb upstream 5000 false Chr10: 26758875-26763874 Glycine max
Glyma.10G112000 5.0kb downstream 5.0kb downstream 8959 true Chr10: 26763875-26772833 Glycine max
Glyma.10G112000 5.0kb downstream 5.0kb downstream 5000 false Chr10: 26767834-26772833 Glycine max
Glyma.10G112000 10.0kb upstream 10.0kb upstream 13959 true Chr10: 26753875-26767833 Glycine max
Glyma.10G112000 10.0kb upstream 10.0kb upstream 10000 false Chr10: 26753875-26763874 Glycine max
Glyma.10G112000 10.0kb downstream 10.0kb downstream 13959 true Chr10: 26763875-26777833 Glycine max
Glyma.10G112000 10.0kb downstream 10.0kb downstream 10000 false Chr10: 26767834-26777833 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040990 5273 Angiosperm View MSA
122312421 5265 Fabidae View MSA
124065552 5270 Rosid View MSA
123743211 5271 Pentapetalae View MSA
122791151 5272 Eudicot View MSA
121351529 5274 Embryophyte View MSA
123424750 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 110.515 0.0 319.68 High  
cufflinks 5.15202 0.0 16.1205   Low
cufflinks 260.508 0.0 879.913 High High
cufflinks 23.1382 0.0 62.0769 High  
cufflinks 33.5029 0.0 89.3819 High  
cufflinks 3.09019 0.0 10.363   Low
cufflinks 23.5371 0.0 63.1582 High  
cufflinks 57.7622 0.0 156.875 High  
cufflinks 23.4793 0.0 62.9753 High  
cufflinks 4.162        
cufflinks 7.76     High  
cufflinks 20.659     High High
cufflinks 2.056        
cufflinks 0.476       Low
cufflinks 1.663        
cufflinks 3.541        
cufflinks 32.123     High High
cufflinks 14.008     High High
cufflinks 2.128        
cufflinks 2.639        
cufflinks 4.797        
cufflinks 3.425        
cufflinks 1.849        
cufflinks 5.602        
cufflinks 2.813        
cufflinks 13.507     High High

0 Strain