Gene : Glyma.10G096000 G. max Wm82.a2.v1
Defline:  (1 of 136) PF05970//PF14214 - PIF1-like helicase (PIF1) // Helitron helicase-like domain at N-terminus (Helitron_like_N) Genomic Order:  960
Name:  ? Glyma.10G096000 Secondary Identifier:  ? PAC:30474132
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G096000 0.5kb upstream 0.5kb upstream 16388 true Chr10: 14775814-14792201 Glycine max
Glyma.10G096000 0.5kb upstream 0.5kb upstream 500 false Chr10: 14775814-14776313 Glycine max
Glyma.10G096000 0.5kb downstream 0.5kb downstream 16388 true Chr10: 14776314-14792701 Glycine max
Glyma.10G096000 0.5kb downstream 0.5kb downstream 500 false Chr10: 14792202-14792701 Glycine max
Glyma.10G096000 1.0kb upstream 1.0kb upstream 16888 true Chr10: 14775314-14792201 Glycine max
Glyma.10G096000 1.0kb upstream 1.0kb upstream 1000 false Chr10: 14775314-14776313 Glycine max
Glyma.10G096000 1.0kb downstream 1.0kb downstream 16888 true Chr10: 14776314-14793201 Glycine max
Glyma.10G096000 1.0kb downstream 1.0kb downstream 1000 false Chr10: 14792202-14793201 Glycine max
Glyma.10G096000 2.0kb upstream 2.0kb upstream 17888 true Chr10: 14774314-14792201 Glycine max
Glyma.10G096000 2.0kb upstream 2.0kb upstream 2000 false Chr10: 14774314-14776313 Glycine max
Glyma.10G096000 2.0kb downstream 2.0kb downstream 17888 true Chr10: 14776314-14794201 Glycine max
Glyma.10G096000 2.0kb downstream 2.0kb downstream 2000 false Chr10: 14792202-14794201 Glycine max
Glyma.10G096000 5.0kb upstream 5.0kb upstream 20888 true Chr10: 14771314-14792201 Glycine max
Glyma.10G096000 5.0kb upstream 5.0kb upstream 5000 false Chr10: 14771314-14776313 Glycine max
Glyma.10G096000 5.0kb downstream 5.0kb downstream 20888 true Chr10: 14776314-14797201 Glycine max
Glyma.10G096000 5.0kb downstream 5.0kb downstream 5000 false Chr10: 14792202-14797201 Glycine max
Glyma.10G096000 10.0kb upstream 10.0kb upstream 25888 true Chr10: 14766314-14792201 Glycine max
Glyma.10G096000 10.0kb upstream 10.0kb upstream 10000 false Chr10: 14766314-14776313 Glycine max
Glyma.10G096000 10.0kb downstream 10.0kb downstream 25888 true Chr10: 14776314-14802201 Glycine max
Glyma.10G096000 10.0kb downstream 10.0kb downstream 10000 false Chr10: 14792202-14802201 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029830 5273 Angiosperm View MSA
122315190 5265 Fabidae View MSA
124051325 5270 Rosid View MSA
123752824 5271 Pentapetalae View MSA
122797633 5272 Eudicot View MSA
121351580 5274 Embryophyte View MSA
123426292 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.00630641 0.0 0.0285209 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0117778 0.0 0.0504741 Low High
cufflinks 0.00559134 0.0 0.0256095 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.001     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.001     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.001     Low  
cufflinks 0.001     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.002     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low High
cufflinks 0.0     Not Expressed Not Expressed

0 Strain