Gene : Glyma.10G099900 G. max Wm82.a2.v1
Defline:  (1 of 9) PTHR11206:SF128 - MATE EFFLUX FAMILY PROTEIN 1 Genomic Order:  999
Name:  ? Glyma.10G099900 Secondary Identifier:  ? PAC:30475174
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G099900 0.5kb upstream 0.5kb upstream 8415 true Chr10: 18166788-18175202 Glycine max
Glyma.10G099900 0.5kb upstream 0.5kb upstream 500 false Chr10: 18166788-18167287 Glycine max
Glyma.10G099900 0.5kb downstream 0.5kb downstream 8415 true Chr10: 18167288-18175702 Glycine max
Glyma.10G099900 0.5kb downstream 0.5kb downstream 500 false Chr10: 18175203-18175702 Glycine max
Glyma.10G099900 1.0kb upstream 1.0kb upstream 8915 true Chr10: 18166288-18175202 Glycine max
Glyma.10G099900 1.0kb upstream 1.0kb upstream 1000 false Chr10: 18166288-18167287 Glycine max
Glyma.10G099900 1.0kb downstream 1.0kb downstream 8915 true Chr10: 18167288-18176202 Glycine max
Glyma.10G099900 1.0kb downstream 1.0kb downstream 1000 false Chr10: 18175203-18176202 Glycine max
Glyma.10G099900 2.0kb upstream 2.0kb upstream 9915 true Chr10: 18165288-18175202 Glycine max
Glyma.10G099900 2.0kb upstream 2.0kb upstream 2000 false Chr10: 18165288-18167287 Glycine max
Glyma.10G099900 2.0kb downstream 2.0kb downstream 9915 true Chr10: 18167288-18177202 Glycine max
Glyma.10G099900 2.0kb downstream 2.0kb downstream 2000 false Chr10: 18175203-18177202 Glycine max
Glyma.10G099900 5.0kb upstream 5.0kb upstream 12915 true Chr10: 18162288-18175202 Glycine max
Glyma.10G099900 5.0kb upstream 5.0kb upstream 5000 false Chr10: 18162288-18167287 Glycine max
Glyma.10G099900 5.0kb downstream 5.0kb downstream 12915 true Chr10: 18167288-18180202 Glycine max
Glyma.10G099900 5.0kb downstream 5.0kb downstream 5000 false Chr10: 18175203-18180202 Glycine max
Glyma.10G099900 10.0kb upstream 10.0kb upstream 17915 true Chr10: 18157288-18175202 Glycine max
Glyma.10G099900 10.0kb upstream 10.0kb upstream 10000 false Chr10: 18157288-18167287 Glycine max
Glyma.10G099900 10.0kb downstream 10.0kb downstream 17915 true Chr10: 18167288-18185202 Glycine max
Glyma.10G099900 10.0kb downstream 10.0kb downstream 10000 false Chr10: 18175203-18185202 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315489 5265 Fabidae View MSA
124072116 5270 Rosid View MSA
123753087 5271 Pentapetalae View MSA
122795715 5272 Eudicot View MSA
122045174 5273 Angiosperm View MSA
121348626 5274 Embryophyte View MSA
123428603 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0454989 0.0 0.185625 Low  
cufflinks 0.386815 0.0 1.44197   High
cufflinks 0.0629556 0.0 0.252998 Low  
cufflinks 0.122725 0.0 0.481911 Low  
cufflinks 0.0438565 0.0 0.179309 Low  
cufflinks 0.576491 0.0 2.11113   High
cufflinks 0.0348199 0.0 0.144198 Low  
cufflinks 0.0251843 0.0 0.106748 Low Low
cufflinks 0.002     Low Low
cufflinks 0.801       High
cufflinks 0.024     Low  
cufflinks 0.013     Low  
cufflinks 0.015     Low  
cufflinks 0.842       High
cufflinks 0.012     Low  
cufflinks 0.072        
cufflinks 0.248       High
cufflinks 0.005     Low Low
cufflinks 0.009     Low  
cufflinks 0.284       High
cufflinks 0.01     Low  
cufflinks 0.011     Low  
cufflinks 0.518       High
cufflinks 0.01     Low  
cufflinks 0.014     Low  

0 Strain