Gene : Glyma.10G102400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR22847:SF502 - WD40 REPEAT PROTEIN MUCILAGE-MODIFIED 1 Genomic Order:  1024
Name:  ? Glyma.10G102400 Secondary Identifier:  ? PAC:30476853
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G102400 0.5kb upstream 0.5kb upstream 18594 true Chr10: 21214005-21232598 Glycine max
Glyma.10G102400 0.5kb upstream 0.5kb upstream 500 false Chr10: 21232099-21232598 Glycine max
Glyma.10G102400 0.5kb downstream 0.5kb downstream 18594 true Chr10: 21213505-21232098 Glycine max
Glyma.10G102400 0.5kb downstream 0.5kb downstream 500 false Chr10: 21213505-21214004 Glycine max
Glyma.10G102400 1.0kb upstream 1.0kb upstream 19094 true Chr10: 21214005-21233098 Glycine max
Glyma.10G102400 1.0kb upstream 1.0kb upstream 1000 false Chr10: 21232099-21233098 Glycine max
Glyma.10G102400 1.0kb downstream 1.0kb downstream 19094 true Chr10: 21213005-21232098 Glycine max
Glyma.10G102400 1.0kb downstream 1.0kb downstream 1000 false Chr10: 21213005-21214004 Glycine max
Glyma.10G102400 2.0kb upstream 2.0kb upstream 20094 true Chr10: 21214005-21234098 Glycine max
Glyma.10G102400 2.0kb upstream 2.0kb upstream 2000 false Chr10: 21232099-21234098 Glycine max
Glyma.10G102400 2.0kb downstream 2.0kb downstream 20094 true Chr10: 21212005-21232098 Glycine max
Glyma.10G102400 2.0kb downstream 2.0kb downstream 2000 false Chr10: 21212005-21214004 Glycine max
Glyma.10G102400 5.0kb upstream 5.0kb upstream 23094 true Chr10: 21214005-21237098 Glycine max
Glyma.10G102400 5.0kb upstream 5.0kb upstream 5000 false Chr10: 21232099-21237098 Glycine max
Glyma.10G102400 5.0kb downstream 5.0kb downstream 23094 true Chr10: 21209005-21232098 Glycine max
Glyma.10G102400 5.0kb downstream 5.0kb downstream 5000 false Chr10: 21209005-21214004 Glycine max
Glyma.10G102400 10.0kb upstream 10.0kb upstream 28094 true Chr10: 21214005-21242098 Glycine max
Glyma.10G102400 10.0kb upstream 10.0kb upstream 10000 false Chr10: 21232099-21242098 Glycine max
Glyma.10G102400 10.0kb downstream 10.0kb downstream 28094 true Chr10: 21204005-21232098 Glycine max
Glyma.10G102400 10.0kb downstream 10.0kb downstream 10000 false Chr10: 21204005-21214004 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299498 5265 Fabidae View MSA
124070895 5270 Rosid View MSA
123751820 5271 Pentapetalae View MSA
122789823 5272 Eudicot View MSA
122046787 5273 Angiosperm View MSA
123429146 5275 Viridiplantae View MSA
121350041 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.0587 0.0 50.5465   Low
cufflinks 17.7715 0.0 78.1446    
cufflinks 16.2412 0.0 71.3762    
cufflinks 15.5304 0.0 67.3116    
cufflinks 16.4369 0.0 64.9817    
cufflinks 17.887 0.0 84.3138    
cufflinks 16.1833 0.0 70.6794    
cufflinks 19.6638 0.0 88.7124   High
cufflinks 15.7813 0.0 68.2866    
cufflinks 0.682       High
cufflinks 0.205       Low
cufflinks 0.625        
cufflinks 0.665        
cufflinks 0.652        
cufflinks 0.241       Low
cufflinks 0.445        
cufflinks 0.506        
cufflinks 0.683       High
cufflinks 0.745       High
cufflinks 0.407        
cufflinks 0.303       Low
cufflinks 0.447        
cufflinks 0.493        
cufflinks 0.297       Low
cufflinks 0.39        
cufflinks 0.429        

0 Strain