Gene : Glyma.10G103200 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR31375:SF3 - POLYGALACTURONASE ADPG1-RELATED Genomic Order:  1032
Name:  ? Glyma.10G103200 Secondary Identifier:  ? PAC:30475667
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-1081 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G103200 0.5kb upstream 0.5kb upstream 5140 true Chr10: 21744162-21749301 Glycine max
Glyma.10G103200 0.5kb upstream 0.5kb upstream 500 false Chr10: 21744162-21744661 Glycine max
Glyma.10G103200 0.5kb downstream 0.5kb downstream 5140 true Chr10: 21744662-21749801 Glycine max
Glyma.10G103200 0.5kb downstream 0.5kb downstream 500 false Chr10: 21749302-21749801 Glycine max
Glyma.10G103200 1.0kb upstream 1.0kb upstream 5640 true Chr10: 21743662-21749301 Glycine max
Glyma.10G103200 1.0kb upstream 1.0kb upstream 1000 false Chr10: 21743662-21744661 Glycine max
Glyma.10G103200 1.0kb downstream 1.0kb downstream 5640 true Chr10: 21744662-21750301 Glycine max
Glyma.10G103200 1.0kb downstream 1.0kb downstream 1000 false Chr10: 21749302-21750301 Glycine max
Glyma.10G103200 2.0kb upstream 2.0kb upstream 6640 true Chr10: 21742662-21749301 Glycine max
Glyma.10G103200 2.0kb upstream 2.0kb upstream 2000 false Chr10: 21742662-21744661 Glycine max
Glyma.10G103200 2.0kb downstream 2.0kb downstream 6640 true Chr10: 21744662-21751301 Glycine max
Glyma.10G103200 2.0kb downstream 2.0kb downstream 2000 false Chr10: 21749302-21751301 Glycine max
Glyma.10G103200 5.0kb upstream 5.0kb upstream 9640 true Chr10: 21739662-21749301 Glycine max
Glyma.10G103200 5.0kb upstream 5.0kb upstream 5000 false Chr10: 21739662-21744661 Glycine max
Glyma.10G103200 5.0kb downstream 5.0kb downstream 9640 true Chr10: 21744662-21754301 Glycine max
Glyma.10G103200 5.0kb downstream 5.0kb downstream 5000 false Chr10: 21749302-21754301 Glycine max
Glyma.10G103200 10.0kb upstream 10.0kb upstream 14640 true Chr10: 21734662-21749301 Glycine max
Glyma.10G103200 10.0kb upstream 10.0kb upstream 10000 false Chr10: 21734662-21744661 Glycine max
Glyma.10G103200 10.0kb downstream 10.0kb downstream 14640 true Chr10: 21744662-21759301 Glycine max
Glyma.10G103200 10.0kb downstream 10.0kb downstream 10000 false Chr10: 21749302-21759301 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314291 5265 Fabidae View MSA
124073768 5270 Rosid View MSA
123750458 5271 Pentapetalae View MSA
122794874 5272 Eudicot View MSA
122047278 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 4.13073 0.0 12.1695    
cufflinks 0.0319189 0.0 0.132956 Low  
cufflinks 0.0200414 0.0 0.086537 Low  
cufflinks 33.2407 0.0 90.67 High High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0343857 0.0 0.142399 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.003     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.231       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.409       High
cufflinks 0.042     Low  
cufflinks 0.004     Low  
cufflinks 0.014     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.007     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.013     Low  
cufflinks 0.009     Low  

0 Strain