Gene : Glyma.10G088100 G. max Wm82.a2.v1
Defline:  (1 of 9) PTHR24007 - BRCA1-ASSOCIATED PROTEIN Genomic Order:  881
Name:  ? Glyma.10G088100 Secondary Identifier:  ? PAC:30476436
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G088100 0.5kb upstream 0.5kb upstream 1930 true Chr10: 11587119-11589048 Glycine max
Glyma.10G088100 0.5kb upstream 0.5kb upstream 500 false Chr10: 11588549-11589048 Glycine max
Glyma.10G088100 0.5kb downstream 0.5kb downstream 1930 true Chr10: 11586619-11588548 Glycine max
Glyma.10G088100 0.5kb downstream 0.5kb downstream 500 false Chr10: 11586619-11587118 Glycine max
Glyma.10G088100 1.0kb upstream 1.0kb upstream 2430 true Chr10: 11587119-11589548 Glycine max
Glyma.10G088100 1.0kb upstream 1.0kb upstream 1000 false Chr10: 11588549-11589548 Glycine max
Glyma.10G088100 1.0kb downstream 1.0kb downstream 2430 true Chr10: 11586119-11588548 Glycine max
Glyma.10G088100 1.0kb downstream 1.0kb downstream 1000 false Chr10: 11586119-11587118 Glycine max
Glyma.10G088100 2.0kb upstream 2.0kb upstream 3430 true Chr10: 11587119-11590548 Glycine max
Glyma.10G088100 2.0kb upstream 2.0kb upstream 2000 false Chr10: 11588549-11590548 Glycine max
Glyma.10G088100 2.0kb downstream 2.0kb downstream 3430 true Chr10: 11585119-11588548 Glycine max
Glyma.10G088100 2.0kb downstream 2.0kb downstream 2000 false Chr10: 11585119-11587118 Glycine max
Glyma.10G088100 5.0kb upstream 5.0kb upstream 6430 true Chr10: 11587119-11593548 Glycine max
Glyma.10G088100 5.0kb upstream 5.0kb upstream 5000 false Chr10: 11588549-11593548 Glycine max
Glyma.10G088100 5.0kb downstream 5.0kb downstream 6430 true Chr10: 11582119-11588548 Glycine max
Glyma.10G088100 5.0kb downstream 5.0kb downstream 5000 false Chr10: 11582119-11587118 Glycine max
Glyma.10G088100 10.0kb upstream 10.0kb upstream 11430 true Chr10: 11587119-11598548 Glycine max
Glyma.10G088100 10.0kb upstream 10.0kb upstream 10000 false Chr10: 11588549-11598548 Glycine max
Glyma.10G088100 10.0kb downstream 10.0kb downstream 11430 true Chr10: 11577119-11588548 Glycine max
Glyma.10G088100 10.0kb downstream 10.0kb downstream 10000 false Chr10: 11577119-11587118 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121665424 5273 Angiosperm View MSA
122314962 5265 Fabidae View MSA
124050250 5270 Rosid View MSA
123619785 5271 Pentapetalae View MSA
122654221 5272 Eudicot View MSA
123429159 5275 Viridiplantae View MSA
120937392 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.012     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.01     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain