Gene : Glyma.10G090000 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR10169:SF38 - DNA TOPOISOMERASE 2 Genomic Order:  900
Name:  ? Glyma.10G090000 Secondary Identifier:  ? PAC:30476948
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G090000 0.5kb upstream 0.5kb upstream 7357 true Chr10: 11989110-11996466 Glycine max
Glyma.10G090000 0.5kb upstream 0.5kb upstream 500 false Chr10: 11995967-11996466 Glycine max
Glyma.10G090000 0.5kb downstream 0.5kb downstream 7357 true Chr10: 11988610-11995966 Glycine max
Glyma.10G090000 0.5kb downstream 0.5kb downstream 500 false Chr10: 11988610-11989109 Glycine max
Glyma.10G090000 1.0kb upstream 1.0kb upstream 7857 true Chr10: 11989110-11996966 Glycine max
Glyma.10G090000 1.0kb upstream 1.0kb upstream 1000 false Chr10: 11995967-11996966 Glycine max
Glyma.10G090000 1.0kb downstream 1.0kb downstream 7857 true Chr10: 11988110-11995966 Glycine max
Glyma.10G090000 1.0kb downstream 1.0kb downstream 1000 false Chr10: 11988110-11989109 Glycine max
Glyma.10G090000 2.0kb upstream 2.0kb upstream 8857 true Chr10: 11989110-11997966 Glycine max
Glyma.10G090000 2.0kb upstream 2.0kb upstream 2000 false Chr10: 11995967-11997966 Glycine max
Glyma.10G090000 2.0kb downstream 2.0kb downstream 8857 true Chr10: 11987110-11995966 Glycine max
Glyma.10G090000 2.0kb downstream 2.0kb downstream 2000 false Chr10: 11987110-11989109 Glycine max
Glyma.10G090000 5.0kb upstream 5.0kb upstream 11857 true Chr10: 11989110-12000966 Glycine max
Glyma.10G090000 5.0kb upstream 5.0kb upstream 5000 false Chr10: 11995967-12000966 Glycine max
Glyma.10G090000 5.0kb downstream 5.0kb downstream 11857 true Chr10: 11984110-11995966 Glycine max
Glyma.10G090000 5.0kb downstream 5.0kb downstream 5000 false Chr10: 11984110-11989109 Glycine max
Glyma.10G090000 10.0kb upstream 10.0kb upstream 16857 true Chr10: 11989110-12005966 Glycine max
Glyma.10G090000 10.0kb upstream 10.0kb upstream 10000 false Chr10: 11995967-12005966 Glycine max
Glyma.10G090000 10.0kb downstream 10.0kb downstream 16857 true Chr10: 11979110-11995966 Glycine max
Glyma.10G090000 10.0kb downstream 10.0kb downstream 10000 false Chr10: 11979110-11989109 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299523 5265 Fabidae View MSA
124064018 5270 Rosid View MSA
123736481 5271 Pentapetalae View MSA
122791740 5272 Eudicot View MSA
122046291 5273 Angiosperm View MSA
121345151 5274 Embryophyte View MSA
123423865 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0558859 0.0 0.216793 Low Low
cufflinks 10.9098 0.0 29.6984    
cufflinks 1.04053 0.0 3.1972    
cufflinks 3.3442 0.0 9.05793    
cufflinks 6.97979 0.0 18.6511    
cufflinks 2.5695 0.0 7.09534    
cufflinks 4.82694 0.0 12.9047    
cufflinks 3.16618 0.0 8.60372    
cufflinks 6.21703 0.0 16.5886    
cufflinks 5.528        
cufflinks 0.756       Low
cufflinks 4.576        
cufflinks 11.354     High  
cufflinks 14.722     High  
cufflinks 0.136       Low
cufflinks 17.831     High  
cufflinks 1.594        
cufflinks 2.869        
cufflinks 22.615     High High
cufflinks 12.768     High  
cufflinks 1.297        
cufflinks 16.005     High  
cufflinks 18.148     High  
cufflinks 0.615       Low
cufflinks 12.512     High  
cufflinks 2.64        

0 Strain