Gene : Glyma.10G090500 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10108//PTHR10108:SF908 - METHYLTRANSFERASE Genomic Order:  905
Name:  ? Glyma.10G090500 Secondary Identifier:  ? PAC:30478346
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-2541 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G090500 0.5kb upstream 0.5kb upstream 6192 true Chr10: 12080564-12086755 Glycine max
Glyma.10G090500 0.5kb upstream 0.5kb upstream 500 false Chr10: 12080564-12081063 Glycine max
Glyma.10G090500 0.5kb downstream 0.5kb downstream 6192 true Chr10: 12081064-12087255 Glycine max
Glyma.10G090500 0.5kb downstream 0.5kb downstream 500 false Chr10: 12086756-12087255 Glycine max
Glyma.10G090500 1.0kb upstream 1.0kb upstream 6692 true Chr10: 12080064-12086755 Glycine max
Glyma.10G090500 1.0kb upstream 1.0kb upstream 1000 false Chr10: 12080064-12081063 Glycine max
Glyma.10G090500 1.0kb downstream 1.0kb downstream 6692 true Chr10: 12081064-12087755 Glycine max
Glyma.10G090500 1.0kb downstream 1.0kb downstream 1000 false Chr10: 12086756-12087755 Glycine max
Glyma.10G090500 2.0kb upstream 2.0kb upstream 7692 true Chr10: 12079064-12086755 Glycine max
Glyma.10G090500 2.0kb upstream 2.0kb upstream 2000 false Chr10: 12079064-12081063 Glycine max
Glyma.10G090500 2.0kb downstream 2.0kb downstream 7692 true Chr10: 12081064-12088755 Glycine max
Glyma.10G090500 2.0kb downstream 2.0kb downstream 2000 false Chr10: 12086756-12088755 Glycine max
Glyma.10G090500 5.0kb upstream 5.0kb upstream 10692 true Chr10: 12076064-12086755 Glycine max
Glyma.10G090500 5.0kb upstream 5.0kb upstream 5000 false Chr10: 12076064-12081063 Glycine max
Glyma.10G090500 5.0kb downstream 5.0kb downstream 10692 true Chr10: 12081064-12091755 Glycine max
Glyma.10G090500 5.0kb downstream 5.0kb downstream 5000 false Chr10: 12086756-12091755 Glycine max
Glyma.10G090500 10.0kb upstream 10.0kb upstream 15692 true Chr10: 12071064-12086755 Glycine max
Glyma.10G090500 10.0kb upstream 10.0kb upstream 10000 false Chr10: 12071064-12081063 Glycine max
Glyma.10G090500 10.0kb downstream 10.0kb downstream 15692 true Chr10: 12081064-12096755 Glycine max
Glyma.10G090500 10.0kb downstream 10.0kb downstream 10000 false Chr10: 12086756-12096755 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041479 5273 Angiosperm View MSA
122305838 5265 Fabidae View MSA
124073694 5270 Rosid View MSA
123743908 5271 Pentapetalae View MSA
122793455 5272 Eudicot View MSA
121345470 5274 Embryophyte View MSA
123426805 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 41.4135 0.0 150.41 High Low
cufflinks 52.9346 0.0 200.463 High  
cufflinks 69.5127 0.0 286.883 High  
cufflinks 88.176 0.0 390.152 High High
cufflinks 85.1801 0.0 372.771 High High
cufflinks 56.7854 0.0 220.733 High  
cufflinks 61.1786 0.0 237.747 High  
cufflinks 59.002 0.0 231.552 High  
cufflinks 77.9851 0.0 332.56 High  
cufflinks 7.762     High High
cufflinks 0.919       Low
cufflinks 4.847        
cufflinks 10.069     High High
cufflinks 13.475     High High
cufflinks 3.052        
cufflinks 3.552        
cufflinks 1.969        
cufflinks 5.703        
cufflinks 5.105        
cufflinks 4.466        
cufflinks 1.179       Low
cufflinks 3.755        
cufflinks 4.991        
cufflinks 0.988       Low
cufflinks 4.263        
cufflinks 1.963        

0 Strain