Gene : Glyma.10G093300 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR12419//PTHR12419:SF25 - OTU DOMAIN CONTAINING PROTEIN Genomic Order:  933
Name:  ? Glyma.10G093300 Secondary Identifier:  ? PAC:30478149
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G093300 0.5kb upstream 0.5kb upstream 5758 true Chr10: 13212422-13218179 Glycine max
Glyma.10G093300 0.5kb upstream 0.5kb upstream 500 false Chr10: 13217680-13218179 Glycine max
Glyma.10G093300 0.5kb downstream 0.5kb downstream 5758 true Chr10: 13211922-13217679 Glycine max
Glyma.10G093300 0.5kb downstream 0.5kb downstream 500 false Chr10: 13211922-13212421 Glycine max
Glyma.10G093300 1.0kb upstream 1.0kb upstream 6258 true Chr10: 13212422-13218679 Glycine max
Glyma.10G093300 1.0kb upstream 1.0kb upstream 1000 false Chr10: 13217680-13218679 Glycine max
Glyma.10G093300 1.0kb downstream 1.0kb downstream 6258 true Chr10: 13211422-13217679 Glycine max
Glyma.10G093300 1.0kb downstream 1.0kb downstream 1000 false Chr10: 13211422-13212421 Glycine max
Glyma.10G093300 2.0kb upstream 2.0kb upstream 7258 true Chr10: 13212422-13219679 Glycine max
Glyma.10G093300 2.0kb upstream 2.0kb upstream 2000 false Chr10: 13217680-13219679 Glycine max
Glyma.10G093300 2.0kb downstream 2.0kb downstream 7258 true Chr10: 13210422-13217679 Glycine max
Glyma.10G093300 2.0kb downstream 2.0kb downstream 2000 false Chr10: 13210422-13212421 Glycine max
Glyma.10G093300 5.0kb upstream 5.0kb upstream 10258 true Chr10: 13212422-13222679 Glycine max
Glyma.10G093300 5.0kb upstream 5.0kb upstream 5000 false Chr10: 13217680-13222679 Glycine max
Glyma.10G093300 5.0kb downstream 5.0kb downstream 10258 true Chr10: 13207422-13217679 Glycine max
Glyma.10G093300 5.0kb downstream 5.0kb downstream 5000 false Chr10: 13207422-13212421 Glycine max
Glyma.10G093300 10.0kb upstream 10.0kb upstream 15258 true Chr10: 13212422-13227679 Glycine max
Glyma.10G093300 10.0kb upstream 10.0kb upstream 10000 false Chr10: 13217680-13227679 Glycine max
Glyma.10G093300 10.0kb downstream 10.0kb downstream 15258 true Chr10: 13202422-13217679 Glycine max
Glyma.10G093300 10.0kb downstream 10.0kb downstream 10000 false Chr10: 13202422-13212421 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124074941 5270 Rosid View MSA
122307233 5265 Fabidae View MSA
123749661 5271 Pentapetalae View MSA
122794711 5272 Eudicot View MSA
122048756 5273 Angiosperm View MSA
121349238 5274 Embryophyte View MSA
123428485 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.5818 0.0 49.0296   High
cufflinks 8.37099 0.0 40.0271   High
cufflinks 5.19543 0.0 25.1505   Low
cufflinks 6.64203 0.0 35.1559    
cufflinks 6.68125 0.0 34.0174    
cufflinks 5.7701 0.0 31.3914    
cufflinks 6.91267 0.0 26.7104    
cufflinks 5.78313 0.0 22.6403    
cufflinks 5.33559 0.0 26.4693    
cufflinks 0.403        
cufflinks 0.175        
cufflinks 0.435        
cufflinks 0.549        
cufflinks 0.553        
cufflinks 0.116       Low
cufflinks 0.579        
cufflinks 0.109       Low
cufflinks 0.572        
cufflinks 0.541        
cufflinks 0.64        
cufflinks 0.12       Low
cufflinks 0.656        
cufflinks 0.714       High
cufflinks 0.153       Low
cufflinks 0.569        
cufflinks 0.135       Low

0 Strain