Gene : Glyma.10G093400 G. max Wm82.a2.v1
Defline:  (1 of 12) PTHR12290 - CORNICHON-RELATED Genomic Order:  934
Name:  ? Glyma.10G093400 Secondary Identifier:  ? PAC:30474769
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G093400 0.5kb upstream 0.5kb upstream 7354 true Chr10: 13246156-13253509 Glycine max
Glyma.10G093400 0.5kb upstream 0.5kb upstream 500 false Chr10: 13246156-13246655 Glycine max
Glyma.10G093400 0.5kb downstream 0.5kb downstream 7354 true Chr10: 13246656-13254009 Glycine max
Glyma.10G093400 0.5kb downstream 0.5kb downstream 500 false Chr10: 13253510-13254009 Glycine max
Glyma.10G093400 1.0kb upstream 1.0kb upstream 7854 true Chr10: 13245656-13253509 Glycine max
Glyma.10G093400 1.0kb upstream 1.0kb upstream 1000 false Chr10: 13245656-13246655 Glycine max
Glyma.10G093400 1.0kb downstream 1.0kb downstream 7854 true Chr10: 13246656-13254509 Glycine max
Glyma.10G093400 1.0kb downstream 1.0kb downstream 1000 false Chr10: 13253510-13254509 Glycine max
Glyma.10G093400 2.0kb upstream 2.0kb upstream 8854 true Chr10: 13244656-13253509 Glycine max
Glyma.10G093400 2.0kb upstream 2.0kb upstream 2000 false Chr10: 13244656-13246655 Glycine max
Glyma.10G093400 2.0kb downstream 2.0kb downstream 8854 true Chr10: 13246656-13255509 Glycine max
Glyma.10G093400 2.0kb downstream 2.0kb downstream 2000 false Chr10: 13253510-13255509 Glycine max
Glyma.10G093400 5.0kb upstream 5.0kb upstream 11854 true Chr10: 13241656-13253509 Glycine max
Glyma.10G093400 5.0kb upstream 5.0kb upstream 5000 false Chr10: 13241656-13246655 Glycine max
Glyma.10G093400 5.0kb downstream 5.0kb downstream 11854 true Chr10: 13246656-13258509 Glycine max
Glyma.10G093400 5.0kb downstream 5.0kb downstream 5000 false Chr10: 13253510-13258509 Glycine max
Glyma.10G093400 10.0kb upstream 10.0kb upstream 16854 true Chr10: 13236656-13253509 Glycine max
Glyma.10G093400 10.0kb upstream 10.0kb upstream 10000 false Chr10: 13236656-13246655 Glycine max
Glyma.10G093400 10.0kb downstream 10.0kb downstream 16854 true Chr10: 13246656-13263509 Glycine max
Glyma.10G093400 10.0kb downstream 10.0kb downstream 10000 false Chr10: 13253510-13263509 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311032 5265 Fabidae View MSA
124067439 5270 Rosid View MSA
123752732 5271 Pentapetalae View MSA
122796851 5272 Eudicot View MSA
122045878 5273 Angiosperm View MSA
121348735 5274 Embryophyte View MSA
123427918 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.18026 0.0 33.5257    
cufflinks 4.69948 0.0 37.2321    
cufflinks 2.95744 0.0 44.9735   Low
cufflinks 3.32509 0.0 19.3453    
cufflinks 6.31154 0.0 28.6699   High
cufflinks 3.2661 0.0 22.5587    
cufflinks 3.33712 0.0 30.5287    
cufflinks 3.80276 0.0 21.1542    
cufflinks 5.40596 0.0 34.1947   High
cufflinks 0.131        
cufflinks 0.021     Low Low
cufflinks 0.277        
cufflinks 0.223        
cufflinks 0.273        
cufflinks 0.104        
cufflinks 0.393        
cufflinks 0.055     Low Low
cufflinks 0.377        
cufflinks 0.386        
cufflinks 0.445        
cufflinks 0.037     Low Low
cufflinks 0.438        
cufflinks 0.412        
cufflinks 0.046     Low Low
cufflinks 0.405        
cufflinks 0.059     Low  

0 Strain