Gene : Glyma.10G095200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR19376:SF11 - DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA1 Genomic Order:  952
Name:  ? Glyma.10G095200 Secondary Identifier:  ? PAC:30477020
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G095200 0.5kb upstream 0.5kb upstream 24216 true Chr10: 13841218-13865433 Glycine max
Glyma.10G095200 0.5kb upstream 0.5kb upstream 500 false Chr10: 13864934-13865433 Glycine max
Glyma.10G095200 0.5kb downstream 0.5kb downstream 24216 true Chr10: 13840718-13864933 Glycine max
Glyma.10G095200 0.5kb downstream 0.5kb downstream 500 false Chr10: 13840718-13841217 Glycine max
Glyma.10G095200 1.0kb upstream 1.0kb upstream 24716 true Chr10: 13841218-13865933 Glycine max
Glyma.10G095200 1.0kb upstream 1.0kb upstream 1000 false Chr10: 13864934-13865933 Glycine max
Glyma.10G095200 1.0kb downstream 1.0kb downstream 24716 true Chr10: 13840218-13864933 Glycine max
Glyma.10G095200 1.0kb downstream 1.0kb downstream 1000 false Chr10: 13840218-13841217 Glycine max
Glyma.10G095200 2.0kb upstream 2.0kb upstream 25716 true Chr10: 13841218-13866933 Glycine max
Glyma.10G095200 2.0kb upstream 2.0kb upstream 2000 false Chr10: 13864934-13866933 Glycine max
Glyma.10G095200 2.0kb downstream 2.0kb downstream 25716 true Chr10: 13839218-13864933 Glycine max
Glyma.10G095200 2.0kb downstream 2.0kb downstream 2000 false Chr10: 13839218-13841217 Glycine max
Glyma.10G095200 5.0kb upstream 5.0kb upstream 28716 true Chr10: 13841218-13869933 Glycine max
Glyma.10G095200 5.0kb upstream 5.0kb upstream 5000 false Chr10: 13864934-13869933 Glycine max
Glyma.10G095200 5.0kb downstream 5.0kb downstream 28716 true Chr10: 13836218-13864933 Glycine max
Glyma.10G095200 5.0kb downstream 5.0kb downstream 5000 false Chr10: 13836218-13841217 Glycine max
Glyma.10G095200 10.0kb upstream 10.0kb upstream 33716 true Chr10: 13841218-13874933 Glycine max
Glyma.10G095200 10.0kb upstream 10.0kb upstream 10000 false Chr10: 13864934-13874933 Glycine max
Glyma.10G095200 10.0kb downstream 10.0kb downstream 33716 true Chr10: 13831218-13864933 Glycine max
Glyma.10G095200 10.0kb downstream 10.0kb downstream 10000 false Chr10: 13831218-13841217 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308558 5265 Fabidae View MSA
124068682 5270 Rosid View MSA
123740783 5271 Pentapetalae View MSA
122786544 5272 Eudicot View MSA
122045680 5273 Angiosperm View MSA
121344248 5274 Embryophyte View MSA
123424891 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.4877 0.0 28.6077   High
cufflinks 5.8756 0.0 15.6795    
cufflinks 3.40932 0.0 9.18595   Low
cufflinks 6.06934 0.0 16.2038    
cufflinks 8.58673 0.0 23.1349    
cufflinks 2.7848 0.0 7.60391   Low
cufflinks 9.85727 0.0 26.7318   High
cufflinks 4.77373 0.0 12.7473    
cufflinks 6.78699 0.0 18.1488    
cufflinks 1.034        
cufflinks 0.69       Low
cufflinks 1.867        
cufflinks 2.965       High
cufflinks 4.243       High
cufflinks 1.381        
cufflinks 0.974        
cufflinks 1.197        
cufflinks 1.664        
cufflinks 2.19       High
cufflinks 0.796       Low
cufflinks 0.992        
cufflinks 0.948        
cufflinks 1.301        
cufflinks 0.804        
cufflinks 0.947        
cufflinks 1.304        

0 Strain