Gene : Glyma.10G143500 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR13683//PTHR13683:SF312 - ASPARTYL PROTEASES Genomic Order:  1435
Name:  ? Glyma.10G143500 Secondary Identifier:  ? PAC:30477219
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G143500 0.5kb upstream 0.5kb upstream 5531 true Chr10: 37803281-37808811 Glycine max
Glyma.10G143500 0.5kb upstream 0.5kb upstream 500 false Chr10: 37808312-37808811 Glycine max
Glyma.10G143500 0.5kb downstream 0.5kb downstream 5531 true Chr10: 37802781-37808311 Glycine max
Glyma.10G143500 0.5kb downstream 0.5kb downstream 500 false Chr10: 37802781-37803280 Glycine max
Glyma.10G143500 1.0kb upstream 1.0kb upstream 6031 true Chr10: 37803281-37809311 Glycine max
Glyma.10G143500 1.0kb upstream 1.0kb upstream 1000 false Chr10: 37808312-37809311 Glycine max
Glyma.10G143500 1.0kb downstream 1.0kb downstream 6031 true Chr10: 37802281-37808311 Glycine max
Glyma.10G143500 1.0kb downstream 1.0kb downstream 1000 false Chr10: 37802281-37803280 Glycine max
Glyma.10G143500 2.0kb upstream 2.0kb upstream 7031 true Chr10: 37803281-37810311 Glycine max
Glyma.10G143500 2.0kb upstream 2.0kb upstream 2000 false Chr10: 37808312-37810311 Glycine max
Glyma.10G143500 2.0kb downstream 2.0kb downstream 7031 true Chr10: 37801281-37808311 Glycine max
Glyma.10G143500 2.0kb downstream 2.0kb downstream 2000 false Chr10: 37801281-37803280 Glycine max
Glyma.10G143500 5.0kb upstream 5.0kb upstream 10031 true Chr10: 37803281-37813311 Glycine max
Glyma.10G143500 5.0kb upstream 5.0kb upstream 5000 false Chr10: 37808312-37813311 Glycine max
Glyma.10G143500 5.0kb downstream 5.0kb downstream 10031 true Chr10: 37798281-37808311 Glycine max
Glyma.10G143500 5.0kb downstream 5.0kb downstream 5000 false Chr10: 37798281-37803280 Glycine max
Glyma.10G143500 10.0kb upstream 10.0kb upstream 15031 true Chr10: 37803281-37818311 Glycine max
Glyma.10G143500 10.0kb upstream 10.0kb upstream 10000 false Chr10: 37808312-37818311 Glycine max
Glyma.10G143500 10.0kb downstream 10.0kb downstream 15031 true Chr10: 37793281-37808311 Glycine max
Glyma.10G143500 10.0kb downstream 10.0kb downstream 10000 false Chr10: 37793281-37803280 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313872 5265 Fabidae View MSA
124071127 5270 Rosid View MSA
123740338 5271 Pentapetalae View MSA
122795387 5272 Eudicot View MSA
122051849 5273 Angiosperm View MSA
121312739 5274 Embryophyte View MSA
123428778 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 143.47 0.0 880.608 High  
cufflinks 89.4177 0.0 440.352 High  
cufflinks 658.148 0.0 14296.7 High High
cufflinks 117.931 0.0 663.042 High  
cufflinks 86.55 0.0 416.928 High  
cufflinks 105.253 0.0 556.173 High  
cufflinks 112.524 0.0 601.602 High  
cufflinks 123.696 0.0 720.597 High  
cufflinks 83.4393 0.0 400.02 High  
cufflinks 10.979     High  
cufflinks 4.604       Low
cufflinks 41.853     High High
cufflinks 8.813     High  
cufflinks 6.142        
cufflinks 5.298     High Low
cufflinks 8.856     High  
cufflinks 11.479     High  
cufflinks 15.517     High  
cufflinks 11.878     High  
cufflinks 12.232     High  
cufflinks 6.312     High  
cufflinks 12.024     High  
cufflinks 8.807     High  
cufflinks 6.99     High  
cufflinks 10.421     High  
cufflinks 11.084     High  

0 Strain