Gene : Glyma.10G146100 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR22778:SF0 - OVARIAN CANCER-ASSOCIATED GENE 2 PROTEIN Genomic Order:  1461
Name:  ? Glyma.10G146100 Secondary Identifier:  ? PAC:30477559
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G146100 0.5kb upstream 0.5kb upstream 4092 true Chr10: 38082402-38086493 Glycine max
Glyma.10G146100 0.5kb upstream 0.5kb upstream 500 false Chr10: 38085994-38086493 Glycine max
Glyma.10G146100 0.5kb downstream 0.5kb downstream 4092 true Chr10: 38081902-38085993 Glycine max
Glyma.10G146100 0.5kb downstream 0.5kb downstream 500 false Chr10: 38081902-38082401 Glycine max
Glyma.10G146100 1.0kb upstream 1.0kb upstream 4592 true Chr10: 38082402-38086993 Glycine max
Glyma.10G146100 1.0kb upstream 1.0kb upstream 1000 false Chr10: 38085994-38086993 Glycine max
Glyma.10G146100 1.0kb downstream 1.0kb downstream 4592 true Chr10: 38081402-38085993 Glycine max
Glyma.10G146100 1.0kb downstream 1.0kb downstream 1000 false Chr10: 38081402-38082401 Glycine max
Glyma.10G146100 2.0kb upstream 2.0kb upstream 5592 true Chr10: 38082402-38087993 Glycine max
Glyma.10G146100 2.0kb upstream 2.0kb upstream 2000 false Chr10: 38085994-38087993 Glycine max
Glyma.10G146100 2.0kb downstream 2.0kb downstream 5592 true Chr10: 38080402-38085993 Glycine max
Glyma.10G146100 2.0kb downstream 2.0kb downstream 2000 false Chr10: 38080402-38082401 Glycine max
Glyma.10G146100 5.0kb upstream 5.0kb upstream 8592 true Chr10: 38082402-38090993 Glycine max
Glyma.10G146100 5.0kb upstream 5.0kb upstream 5000 false Chr10: 38085994-38090993 Glycine max
Glyma.10G146100 5.0kb downstream 5.0kb downstream 8592 true Chr10: 38077402-38085993 Glycine max
Glyma.10G146100 5.0kb downstream 5.0kb downstream 5000 false Chr10: 38077402-38082401 Glycine max
Glyma.10G146100 10.0kb upstream 10.0kb upstream 13592 true Chr10: 38082402-38095993 Glycine max
Glyma.10G146100 10.0kb upstream 10.0kb upstream 10000 false Chr10: 38085994-38095993 Glycine max
Glyma.10G146100 10.0kb downstream 10.0kb downstream 13592 true Chr10: 38072402-38085993 Glycine max
Glyma.10G146100 10.0kb downstream 10.0kb downstream 10000 false Chr10: 38072402-38082401 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122246957 5265 Fabidae Singleton cluster - no MSA
123990827 5270 Rosid Singleton cluster - no MSA
123748273 5271 Pentapetalae View MSA
122787224 5272 Eudicot View MSA
122041526 5273 Angiosperm View MSA
121343974 5274 Embryophyte View MSA
123427771 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.47243 0.0 10.6433   High
cufflinks 2.76213 0.0 8.74006    
cufflinks 1.79644 0.0 6.02605    
cufflinks 2.56941 0.0 8.21387    
cufflinks 2.69254 0.0 8.56399    
cufflinks 0.882463 0.0 3.15929   Low
cufflinks 2.7633 0.0 8.76528    
cufflinks 2.39553 0.0 7.72059    
cufflinks 2.07031 0.0 6.81288    
cufflinks 1.382        
cufflinks 0.346       Low
cufflinks 2.62        
cufflinks 2.292        
cufflinks 3.277       High
cufflinks 1.065        
cufflinks 1.855        
cufflinks 0.691        
cufflinks 2.072        
cufflinks 3.431       High
cufflinks 1.33        
cufflinks 0.634       Low
cufflinks 1.785        
cufflinks 2.817       High
cufflinks 0.406       Low
cufflinks 1.673        
cufflinks 0.954        

0 Strain