Gene : Glyma.10G138500 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31734:SF15 - AUXIN-RESPONSIVE PROTEIN IAA20-RELATED Genomic Order:  1385
Name:  ? Glyma.10G138500 Secondary Identifier:  ? PAC:30477209
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G138500 0.5kb upstream 0.5kb upstream 2104 true Chr10: 37212160-37214263 Glycine max
Glyma.10G138500 0.5kb upstream 0.5kb upstream 500 false Chr10: 37213764-37214263 Glycine max
Glyma.10G138500 0.5kb downstream 0.5kb downstream 2104 true Chr10: 37211660-37213763 Glycine max
Glyma.10G138500 0.5kb downstream 0.5kb downstream 500 false Chr10: 37211660-37212159 Glycine max
Glyma.10G138500 1.0kb upstream 1.0kb upstream 2604 true Chr10: 37212160-37214763 Glycine max
Glyma.10G138500 1.0kb upstream 1.0kb upstream 1000 false Chr10: 37213764-37214763 Glycine max
Glyma.10G138500 1.0kb downstream 1.0kb downstream 2604 true Chr10: 37211160-37213763 Glycine max
Glyma.10G138500 1.0kb downstream 1.0kb downstream 1000 false Chr10: 37211160-37212159 Glycine max
Glyma.10G138500 2.0kb upstream 2.0kb upstream 3604 true Chr10: 37212160-37215763 Glycine max
Glyma.10G138500 2.0kb upstream 2.0kb upstream 2000 false Chr10: 37213764-37215763 Glycine max
Glyma.10G138500 2.0kb downstream 2.0kb downstream 3604 true Chr10: 37210160-37213763 Glycine max
Glyma.10G138500 2.0kb downstream 2.0kb downstream 2000 false Chr10: 37210160-37212159 Glycine max
Glyma.10G138500 5.0kb upstream 5.0kb upstream 6604 true Chr10: 37212160-37218763 Glycine max
Glyma.10G138500 5.0kb upstream 5.0kb upstream 5000 false Chr10: 37213764-37218763 Glycine max
Glyma.10G138500 5.0kb downstream 5.0kb downstream 6604 true Chr10: 37207160-37213763 Glycine max
Glyma.10G138500 5.0kb downstream 5.0kb downstream 5000 false Chr10: 37207160-37212159 Glycine max
Glyma.10G138500 10.0kb upstream 10.0kb upstream 11604 true Chr10: 37212160-37223763 Glycine max
Glyma.10G138500 10.0kb upstream 10.0kb upstream 10000 false Chr10: 37213764-37223763 Glycine max
Glyma.10G138500 10.0kb downstream 10.0kb downstream 11604 true Chr10: 37202160-37213763 Glycine max
Glyma.10G138500 10.0kb downstream 10.0kb downstream 10000 false Chr10: 37202160-37212159 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297026 5265 Fabidae View MSA
124071177 5270 Rosid View MSA
123752177 5271 Pentapetalae View MSA
122794866 5272 Eudicot View MSA
122051273 5273 Angiosperm View MSA
121350717 5274 Embryophyte View MSA
123381856 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.73608 0.0 6.24039    
cufflinks 0.178044 0.0 0.709451 Low  
cufflinks 0.0158172 0.0 0.0748349 Low Low
cufflinks 0.453147 0.0 1.74105    
cufflinks 1.10794 0.0 4.08997    
cufflinks 2.87276 0.0 9.91415   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.30634 0.0 1.19612    
cufflinks 0.418413 0.0 1.61375    
cufflinks 1.465       High
cufflinks 0.118        
cufflinks 0.093     Low  
cufflinks 1.906       High
cufflinks 1.426       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.445        
cufflinks 0.3        
cufflinks 0.066     Low Low
cufflinks 0.062     Low Low
cufflinks 0.266        
cufflinks 0.542        
cufflinks 0.387        
cufflinks 0.678        
cufflinks 0.035     Low Low
cufflinks 0.137        
cufflinks 0.745        

0 Strain