Gene : Glyma.10G138600 G. max Wm82.a2.v1
Defline:  (1 of 4) 1.3.3.4 - Protoporphyrinogen oxidase / Protoporphyrinogenase Genomic Order:  1386
Name:  ? Glyma.10G138600 Secondary Identifier:  ? PAC:30477446
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax CHLOROPHYLL-SYN Glycine max pathologic  
Gmax HEME-BIOSYNTHESIS-II Glycine max pathologic  
Gmax PWY-5918 Glycine max pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G138600 0.5kb upstream 0.5kb upstream 5945 true Chr10: 37216983-37222927 Glycine max
Glyma.10G138600 0.5kb upstream 0.5kb upstream 500 false Chr10: 37222428-37222927 Glycine max
Glyma.10G138600 0.5kb downstream 0.5kb downstream 5945 true Chr10: 37216483-37222427 Glycine max
Glyma.10G138600 0.5kb downstream 0.5kb downstream 500 false Chr10: 37216483-37216982 Glycine max
Glyma.10G138600 1.0kb upstream 1.0kb upstream 6445 true Chr10: 37216983-37223427 Glycine max
Glyma.10G138600 1.0kb upstream 1.0kb upstream 1000 false Chr10: 37222428-37223427 Glycine max
Glyma.10G138600 1.0kb downstream 1.0kb downstream 6445 true Chr10: 37215983-37222427 Glycine max
Glyma.10G138600 1.0kb downstream 1.0kb downstream 1000 false Chr10: 37215983-37216982 Glycine max
Glyma.10G138600 2.0kb upstream 2.0kb upstream 7445 true Chr10: 37216983-37224427 Glycine max
Glyma.10G138600 2.0kb upstream 2.0kb upstream 2000 false Chr10: 37222428-37224427 Glycine max
Glyma.10G138600 2.0kb downstream 2.0kb downstream 7445 true Chr10: 37214983-37222427 Glycine max
Glyma.10G138600 2.0kb downstream 2.0kb downstream 2000 false Chr10: 37214983-37216982 Glycine max
Glyma.10G138600 5.0kb upstream 5.0kb upstream 10445 true Chr10: 37216983-37227427 Glycine max
Glyma.10G138600 5.0kb upstream 5.0kb upstream 5000 false Chr10: 37222428-37227427 Glycine max
Glyma.10G138600 5.0kb downstream 5.0kb downstream 10445 true Chr10: 37211983-37222427 Glycine max
Glyma.10G138600 5.0kb downstream 5.0kb downstream 5000 false Chr10: 37211983-37216982 Glycine max
Glyma.10G138600 10.0kb upstream 10.0kb upstream 15445 true Chr10: 37216983-37232427 Glycine max
Glyma.10G138600 10.0kb upstream 10.0kb upstream 10000 false Chr10: 37222428-37232427 Glycine max
Glyma.10G138600 10.0kb downstream 10.0kb downstream 15445 true Chr10: 37206983-37222427 Glycine max
Glyma.10G138600 10.0kb downstream 10.0kb downstream 10000 false Chr10: 37206983-37216982 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305457 5265 Fabidae View MSA
124065931 5270 Rosid View MSA
123747490 5271 Pentapetalae View MSA
122787686 5272 Eudicot View MSA
122041725 5273 Angiosperm View MSA
121347394 5274 Embryophyte View MSA
123424000 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 25.2153 0.0 68.186 High High
cufflinks 22.2182 0.0 59.6789 High High
cufflinks 9.18998 0.0 24.8687    
cufflinks 12.7165 0.0 33.9872    
cufflinks 11.4911 0.0 30.7653    
cufflinks 6.3879 0.0 17.681   Low
cufflinks 14.5573 0.0 38.8397    
cufflinks 11.3646 0.0 30.4564    
cufflinks 7.96379 0.0 21.6921    
cufflinks 6.402        
cufflinks 1.619       Low
cufflinks 4.419        
cufflinks 2.386        
cufflinks 2.711        
cufflinks 3.316        
cufflinks 19.337     High High
cufflinks 2.103        
cufflinks 6.023        
cufflinks 10.505     High  
cufflinks 18.095     High High
cufflinks 2.056        
cufflinks 16.359     High High
cufflinks 16.622     High High
cufflinks 1.995       Low
cufflinks 18.507     High High
cufflinks 1.81       Low

0 Strain