Gene : Glyma.10G141800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11081:SF9 - FLAP ENDONUCLEASE 1 Genomic Order:  1418
Name:  ? Glyma.10G141800 Secondary Identifier:  ? PAC:30477264
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G141800 0.5kb upstream 0.5kb upstream 6245 true Chr10: 37510803-37517047 Glycine max
Glyma.10G141800 0.5kb upstream 0.5kb upstream 500 false Chr10: 37516548-37517047 Glycine max
Glyma.10G141800 0.5kb downstream 0.5kb downstream 6245 true Chr10: 37510303-37516547 Glycine max
Glyma.10G141800 0.5kb downstream 0.5kb downstream 500 false Chr10: 37510303-37510802 Glycine max
Glyma.10G141800 1.0kb upstream 1.0kb upstream 6745 true Chr10: 37510803-37517547 Glycine max
Glyma.10G141800 1.0kb upstream 1.0kb upstream 1000 false Chr10: 37516548-37517547 Glycine max
Glyma.10G141800 1.0kb downstream 1.0kb downstream 6745 true Chr10: 37509803-37516547 Glycine max
Glyma.10G141800 1.0kb downstream 1.0kb downstream 1000 false Chr10: 37509803-37510802 Glycine max
Glyma.10G141800 2.0kb upstream 2.0kb upstream 7745 true Chr10: 37510803-37518547 Glycine max
Glyma.10G141800 2.0kb upstream 2.0kb upstream 2000 false Chr10: 37516548-37518547 Glycine max
Glyma.10G141800 2.0kb downstream 2.0kb downstream 7745 true Chr10: 37508803-37516547 Glycine max
Glyma.10G141800 2.0kb downstream 2.0kb downstream 2000 false Chr10: 37508803-37510802 Glycine max
Glyma.10G141800 5.0kb upstream 5.0kb upstream 10745 true Chr10: 37510803-37521547 Glycine max
Glyma.10G141800 5.0kb upstream 5.0kb upstream 5000 false Chr10: 37516548-37521547 Glycine max
Glyma.10G141800 5.0kb downstream 5.0kb downstream 10745 true Chr10: 37505803-37516547 Glycine max
Glyma.10G141800 5.0kb downstream 5.0kb downstream 5000 false Chr10: 37505803-37510802 Glycine max
Glyma.10G141800 10.0kb upstream 10.0kb upstream 15745 true Chr10: 37510803-37526547 Glycine max
Glyma.10G141800 10.0kb upstream 10.0kb upstream 10000 false Chr10: 37516548-37526547 Glycine max
Glyma.10G141800 10.0kb downstream 10.0kb downstream 15745 true Chr10: 37500803-37516547 Glycine max
Glyma.10G141800 10.0kb downstream 10.0kb downstream 10000 false Chr10: 37500803-37510802 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300730 5265 Fabidae View MSA
124061895 5270 Rosid View MSA
123737846 5271 Pentapetalae View MSA
122788743 5272 Eudicot View MSA
122045143 5273 Angiosperm View MSA
121348118 5274 Embryophyte View MSA
123424263 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.35076 0.0 20.9842    
cufflinks 14.9981 0.0 56.4493   High
cufflinks 4.352 0.0 20.1478   Low
cufflinks 9.2415 0.0 35.7321    
cufflinks 6.61457 0.0 29.9073    
cufflinks 5.19674 0.0 20.3688    
cufflinks 12.2946 0.0 48.1155   High
cufflinks 8.44675 0.0 33.2849    
cufflinks 7.22715 0.0 31.9151    
cufflinks 0.514        
cufflinks 0.118       Low
cufflinks 0.455        
cufflinks 0.653        
cufflinks 0.698        
cufflinks 0.283        
cufflinks 0.578        
cufflinks 0.265        
cufflinks 0.511        
cufflinks 1.033       High
cufflinks 0.453        
cufflinks 0.157       Low
cufflinks 0.507        
cufflinks 0.843       High
cufflinks 0.137       Low
cufflinks 0.607        
cufflinks 0.217        

0 Strain