Gene : Glyma.10G142200 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10641:SF618 - MYB DOMAIN PROTEIN 55 Genomic Order:  1422
Name:  ? Glyma.10G142200 Secondary Identifier:  ? PAC:30474644
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G142200 0.5kb upstream 0.5kb upstream 4922 true Chr10: 37648395-37653316 Glycine max
Glyma.10G142200 0.5kb upstream 0.5kb upstream 500 false Chr10: 37652817-37653316 Glycine max
Glyma.10G142200 0.5kb downstream 0.5kb downstream 4922 true Chr10: 37647895-37652816 Glycine max
Glyma.10G142200 0.5kb downstream 0.5kb downstream 500 false Chr10: 37647895-37648394 Glycine max
Glyma.10G142200 1.0kb upstream 1.0kb upstream 5422 true Chr10: 37648395-37653816 Glycine max
Glyma.10G142200 1.0kb upstream 1.0kb upstream 1000 false Chr10: 37652817-37653816 Glycine max
Glyma.10G142200 1.0kb downstream 1.0kb downstream 5422 true Chr10: 37647395-37652816 Glycine max
Glyma.10G142200 1.0kb downstream 1.0kb downstream 1000 false Chr10: 37647395-37648394 Glycine max
Glyma.10G142200 2.0kb upstream 2.0kb upstream 6422 true Chr10: 37648395-37654816 Glycine max
Glyma.10G142200 2.0kb upstream 2.0kb upstream 2000 false Chr10: 37652817-37654816 Glycine max
Glyma.10G142200 2.0kb downstream 2.0kb downstream 6422 true Chr10: 37646395-37652816 Glycine max
Glyma.10G142200 2.0kb downstream 2.0kb downstream 2000 false Chr10: 37646395-37648394 Glycine max
Glyma.10G142200 5.0kb upstream 5.0kb upstream 9422 true Chr10: 37648395-37657816 Glycine max
Glyma.10G142200 5.0kb upstream 5.0kb upstream 5000 false Chr10: 37652817-37657816 Glycine max
Glyma.10G142200 5.0kb downstream 5.0kb downstream 9422 true Chr10: 37643395-37652816 Glycine max
Glyma.10G142200 5.0kb downstream 5.0kb downstream 5000 false Chr10: 37643395-37648394 Glycine max
Glyma.10G142200 10.0kb upstream 10.0kb upstream 14422 true Chr10: 37648395-37662816 Glycine max
Glyma.10G142200 10.0kb upstream 10.0kb upstream 10000 false Chr10: 37652817-37662816 Glycine max
Glyma.10G142200 10.0kb downstream 10.0kb downstream 14422 true Chr10: 37638395-37652816 Glycine max
Glyma.10G142200 10.0kb downstream 10.0kb downstream 10000 false Chr10: 37638395-37648394 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310896 5265 Fabidae View MSA
124070953 5270 Rosid View MSA
123745100 5271 Pentapetalae View MSA
122796774 5272 Eudicot View MSA
122046378 5273 Angiosperm View MSA
121349090 5274 Embryophyte View MSA
123381162 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.16667 0.0 9.98884    
cufflinks 2.19448 0.0 9.984    
cufflinks 1.25408 0.0 4.93866   Low
cufflinks 1.57718 0.0 7.86703   Low
cufflinks 8.03897 0.0 25.812    
cufflinks 8.97621 0.0 28.2958    
cufflinks 22.1623 0.0 69.1524 High High
cufflinks 11.6277 0.0 37.0341    
cufflinks 4.46514 0.0 16.3649    
cufflinks 1.516       High
cufflinks 0.081       Low
cufflinks 0.426        
cufflinks 3.574       High
cufflinks 2.326       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.565        
cufflinks 0.352        
cufflinks 0.362        
cufflinks 0.388        
cufflinks 0.438        
cufflinks 0.159        
cufflinks 0.469        
cufflinks 0.251        
cufflinks 0.077       Low
cufflinks 0.521        
cufflinks 0.499        

0 Strain