Gene : Glyma.10G165400 G. max Wm82.a2.v1
Defline:  (1 of 140) PF01657 - Salt stress response/antifungal (Stress-antifung) Genomic Order:  1654
Name:  ? Glyma.10G165400 Secondary Identifier:  ? PAC:30474415
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G165400 0.5kb upstream 0.5kb upstream 2824 true Chr10: 39965411-39968234 Glycine max
Glyma.10G165400 0.5kb upstream 0.5kb upstream 500 false Chr10: 39965411-39965910 Glycine max
Glyma.10G165400 0.5kb downstream 0.5kb downstream 2824 true Chr10: 39965911-39968734 Glycine max
Glyma.10G165400 0.5kb downstream 0.5kb downstream 500 false Chr10: 39968235-39968734 Glycine max
Glyma.10G165400 1.0kb upstream 1.0kb upstream 3324 true Chr10: 39964911-39968234 Glycine max
Glyma.10G165400 1.0kb upstream 1.0kb upstream 1000 false Chr10: 39964911-39965910 Glycine max
Glyma.10G165400 1.0kb downstream 1.0kb downstream 3324 true Chr10: 39965911-39969234 Glycine max
Glyma.10G165400 1.0kb downstream 1.0kb downstream 1000 false Chr10: 39968235-39969234 Glycine max
Glyma.10G165400 2.0kb upstream 2.0kb upstream 4324 true Chr10: 39963911-39968234 Glycine max
Glyma.10G165400 2.0kb upstream 2.0kb upstream 2000 false Chr10: 39963911-39965910 Glycine max
Glyma.10G165400 2.0kb downstream 2.0kb downstream 4324 true Chr10: 39965911-39970234 Glycine max
Glyma.10G165400 2.0kb downstream 2.0kb downstream 2000 false Chr10: 39968235-39970234 Glycine max
Glyma.10G165400 5.0kb upstream 5.0kb upstream 7324 true Chr10: 39960911-39968234 Glycine max
Glyma.10G165400 5.0kb upstream 5.0kb upstream 5000 false Chr10: 39960911-39965910 Glycine max
Glyma.10G165400 5.0kb downstream 5.0kb downstream 7324 true Chr10: 39965911-39973234 Glycine max
Glyma.10G165400 5.0kb downstream 5.0kb downstream 5000 false Chr10: 39968235-39973234 Glycine max
Glyma.10G165400 10.0kb upstream 10.0kb upstream 12324 true Chr10: 39955911-39968234 Glycine max
Glyma.10G165400 10.0kb upstream 10.0kb upstream 10000 false Chr10: 39955911-39965910 Glycine max
Glyma.10G165400 10.0kb downstream 10.0kb downstream 12324 true Chr10: 39965911-39978234 Glycine max
Glyma.10G165400 10.0kb downstream 10.0kb downstream 10000 false Chr10: 39968235-39978234 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040946 5273 Angiosperm View MSA
122314523 5265 Fabidae View MSA
124073455 5270 Rosid View MSA
123744739 5271 Pentapetalae View MSA
122771237 5272 Eudicot View MSA
121309775 5274 Embryophyte View MSA
123347437 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0432713 0.0 0.184826 Low Low
cufflinks 0.354596 0.0 1.36818    
cufflinks 0.204398 0.0 0.805536    
cufflinks 0.468783 0.0 1.78567    
cufflinks 0.6611 0.0 2.48049    
cufflinks 0.33614 0.0 1.30057    
cufflinks 0.303596 0.0 1.17811    
cufflinks 0.816262 0.0 3.03136   High
cufflinks 0.045     Low  
cufflinks 0.043     Low  
cufflinks 0.066     Low  
cufflinks 0.022     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.04     Low  
cufflinks 0.048     Low  
cufflinks 0.441       High
cufflinks 0.022     Low  
cufflinks 0.005     Low Low
cufflinks 0.008     Low Low
cufflinks 0.214       High
cufflinks 0.005     Low Low
cufflinks 0.042     Low  
cufflinks 0.081        
cufflinks 0.018     Low  
cufflinks 0.158       High

0 Strain