Gene : Glyma.10G165500 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR22884//PTHR22884:SF376 - SET DOMAIN PROTEINS Genomic Order:  1655
Name:  ? Glyma.10G165500 Secondary Identifier:  ? PAC:30473944
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G165500 0.5kb upstream 0.5kb upstream 4912 true Chr10: 39970398-39975309 Glycine max
Glyma.10G165500 0.5kb upstream 0.5kb upstream 500 false Chr10: 39970398-39970897 Glycine max
Glyma.10G165500 0.5kb downstream 0.5kb downstream 4912 true Chr10: 39970898-39975809 Glycine max
Glyma.10G165500 0.5kb downstream 0.5kb downstream 500 false Chr10: 39975310-39975809 Glycine max
Glyma.10G165500 1.0kb upstream 1.0kb upstream 5412 true Chr10: 39969898-39975309 Glycine max
Glyma.10G165500 1.0kb upstream 1.0kb upstream 1000 false Chr10: 39969898-39970897 Glycine max
Glyma.10G165500 1.0kb downstream 1.0kb downstream 5412 true Chr10: 39970898-39976309 Glycine max
Glyma.10G165500 1.0kb downstream 1.0kb downstream 1000 false Chr10: 39975310-39976309 Glycine max
Glyma.10G165500 2.0kb upstream 2.0kb upstream 6412 true Chr10: 39968898-39975309 Glycine max
Glyma.10G165500 2.0kb upstream 2.0kb upstream 2000 false Chr10: 39968898-39970897 Glycine max
Glyma.10G165500 2.0kb downstream 2.0kb downstream 6412 true Chr10: 39970898-39977309 Glycine max
Glyma.10G165500 2.0kb downstream 2.0kb downstream 2000 false Chr10: 39975310-39977309 Glycine max
Glyma.10G165500 5.0kb upstream 5.0kb upstream 9412 true Chr10: 39965898-39975309 Glycine max
Glyma.10G165500 5.0kb upstream 5.0kb upstream 5000 false Chr10: 39965898-39970897 Glycine max
Glyma.10G165500 5.0kb downstream 5.0kb downstream 9412 true Chr10: 39970898-39980309 Glycine max
Glyma.10G165500 5.0kb downstream 5.0kb downstream 5000 false Chr10: 39975310-39980309 Glycine max
Glyma.10G165500 10.0kb upstream 10.0kb upstream 14412 true Chr10: 39960898-39975309 Glycine max
Glyma.10G165500 10.0kb upstream 10.0kb upstream 10000 false Chr10: 39960898-39970897 Glycine max
Glyma.10G165500 10.0kb downstream 10.0kb downstream 14412 true Chr10: 39970898-39985309 Glycine max
Glyma.10G165500 10.0kb downstream 10.0kb downstream 10000 false Chr10: 39975310-39985309 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310978 5265 Fabidae View MSA
124073861 5270 Rosid View MSA
123746063 5271 Pentapetalae View MSA
122795414 5272 Eudicot View MSA
122049912 5273 Angiosperm View MSA
123428946 5275 Viridiplantae View MSA
121350319 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0186254 0.0 0.0792364 Low  
cufflinks 0.00875044 0.0 0.0396835 Low Low
cufflinks 0.0219401 0.0 0.0918436 Low  
cufflinks 0.0243789 0.0 0.101549 Low  
cufflinks 0.0471334 0.0 0.189933 Low  
cufflinks 0.0170127 0.0 0.0729082 Low  
cufflinks 0.0326968 0.0 0.134124 Low  
cufflinks 0.0979674 0.0 0.383781 Low High
cufflinks 0.00904903 0.0 0.0409287 Low Low
cufflinks 0.089     Low High
cufflinks 0.039     Low  
cufflinks 0.038     Low  
cufflinks 0.025     Low  
cufflinks 0.037     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.008     Low  
cufflinks 0.017     Low  
cufflinks 0.087     Low High
cufflinks 0.009     Low  
cufflinks 0.008     Low  
cufflinks 0.013     Low  
cufflinks 0.016     Low  
cufflinks 0.004     Low Low
cufflinks 0.021     Low  
cufflinks 0.008     Low  
cufflinks 0.024     Low  

0 Strain