Gene : Glyma.10G166000 G. max Wm82.a2.v1
Defline:  (1 of 3) 4.1.2.5 - L-threonine aldolase / L-threonine acetaldehyde-lyase Genomic Order:  1660
Name:  ? Glyma.10G166000 Secondary Identifier:  ? PAC:30477308
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G166000 0.5kb upstream 0.5kb upstream 5968 true Chr10: 40023657-40029624 Glycine max
Glyma.10G166000 0.5kb upstream 0.5kb upstream 500 false Chr10: 40023657-40024156 Glycine max
Glyma.10G166000 0.5kb downstream 0.5kb downstream 5968 true Chr10: 40024157-40030124 Glycine max
Glyma.10G166000 0.5kb downstream 0.5kb downstream 500 false Chr10: 40029625-40030124 Glycine max
Glyma.10G166000 1.0kb upstream 1.0kb upstream 6468 true Chr10: 40023157-40029624 Glycine max
Glyma.10G166000 1.0kb upstream 1.0kb upstream 1000 false Chr10: 40023157-40024156 Glycine max
Glyma.10G166000 1.0kb downstream 1.0kb downstream 6468 true Chr10: 40024157-40030624 Glycine max
Glyma.10G166000 1.0kb downstream 1.0kb downstream 1000 false Chr10: 40029625-40030624 Glycine max
Glyma.10G166000 2.0kb upstream 2.0kb upstream 7468 true Chr10: 40022157-40029624 Glycine max
Glyma.10G166000 2.0kb upstream 2.0kb upstream 2000 false Chr10: 40022157-40024156 Glycine max
Glyma.10G166000 2.0kb downstream 2.0kb downstream 7468 true Chr10: 40024157-40031624 Glycine max
Glyma.10G166000 2.0kb downstream 2.0kb downstream 2000 false Chr10: 40029625-40031624 Glycine max
Glyma.10G166000 5.0kb upstream 5.0kb upstream 10468 true Chr10: 40019157-40029624 Glycine max
Glyma.10G166000 5.0kb upstream 5.0kb upstream 5000 false Chr10: 40019157-40024156 Glycine max
Glyma.10G166000 5.0kb downstream 5.0kb downstream 10468 true Chr10: 40024157-40034624 Glycine max
Glyma.10G166000 5.0kb downstream 5.0kb downstream 5000 false Chr10: 40029625-40034624 Glycine max
Glyma.10G166000 10.0kb upstream 10.0kb upstream 15468 true Chr10: 40014157-40029624 Glycine max
Glyma.10G166000 10.0kb upstream 10.0kb upstream 10000 false Chr10: 40014157-40024156 Glycine max
Glyma.10G166000 10.0kb downstream 10.0kb downstream 15468 true Chr10: 40024157-40039624 Glycine max
Glyma.10G166000 10.0kb downstream 10.0kb downstream 10000 false Chr10: 40029625-40039624 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297215 5265 Fabidae View MSA
124072258 5270 Rosid View MSA
123752344 5271 Pentapetalae View MSA
122796075 5272 Eudicot View MSA
122044905 5273 Angiosperm View MSA
121345445 5274 Embryophyte View MSA
123424169 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 78.5502 0.0 475.826 High High
cufflinks 16.6724 0.0 74.6231    
cufflinks 44.9578 0.0 224.238 High  
cufflinks 13.2845 0.0 60.2333   Low
cufflinks 16.4247 0.0 78.8337    
cufflinks 14.3172 0.0 64.4207    
cufflinks 35.954 0.0 161.747 High  
cufflinks 27.4993 0.0 128.474 High  
cufflinks 27.2239 0.0 125.209 High  
cufflinks 1.857        
cufflinks 32.271     High High
cufflinks 1.34        
cufflinks 0.564       Low
cufflinks 0.955        
cufflinks 11.75     High High
cufflinks 1.638        
cufflinks 0.893        
cufflinks 1.033        
cufflinks 0.935        
cufflinks 2.33        
cufflinks 15.537     High High
cufflinks 1.34        
cufflinks 0.578       Low
cufflinks 27.862     High High
cufflinks 2.445        
cufflinks 2.179        

0 Strain