Gene : Glyma.10G167200 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR22809:SF5 - METHYLTRANSFERASE FAMILY PROTEIN Genomic Order:  1672
Name:  ? Glyma.10G167200 Secondary Identifier:  ? PAC:30477927
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G167200 0.5kb upstream 0.5kb upstream 4544 true Chr10: 40156791-40161334 Glycine max
Glyma.10G167200 0.5kb upstream 0.5kb upstream 500 false Chr10: 40160835-40161334 Glycine max
Glyma.10G167200 0.5kb downstream 0.5kb downstream 4544 true Chr10: 40156291-40160834 Glycine max
Glyma.10G167200 0.5kb downstream 0.5kb downstream 500 false Chr10: 40156291-40156790 Glycine max
Glyma.10G167200 1.0kb upstream 1.0kb upstream 5044 true Chr10: 40156791-40161834 Glycine max
Glyma.10G167200 1.0kb upstream 1.0kb upstream 1000 false Chr10: 40160835-40161834 Glycine max
Glyma.10G167200 1.0kb downstream 1.0kb downstream 5044 true Chr10: 40155791-40160834 Glycine max
Glyma.10G167200 1.0kb downstream 1.0kb downstream 1000 false Chr10: 40155791-40156790 Glycine max
Glyma.10G167200 2.0kb upstream 2.0kb upstream 6044 true Chr10: 40156791-40162834 Glycine max
Glyma.10G167200 2.0kb upstream 2.0kb upstream 2000 false Chr10: 40160835-40162834 Glycine max
Glyma.10G167200 2.0kb downstream 2.0kb downstream 6044 true Chr10: 40154791-40160834 Glycine max
Glyma.10G167200 2.0kb downstream 2.0kb downstream 2000 false Chr10: 40154791-40156790 Glycine max
Glyma.10G167200 5.0kb upstream 5.0kb upstream 9044 true Chr10: 40156791-40165834 Glycine max
Glyma.10G167200 5.0kb upstream 5.0kb upstream 5000 false Chr10: 40160835-40165834 Glycine max
Glyma.10G167200 5.0kb downstream 5.0kb downstream 9044 true Chr10: 40151791-40160834 Glycine max
Glyma.10G167200 5.0kb downstream 5.0kb downstream 5000 false Chr10: 40151791-40156790 Glycine max
Glyma.10G167200 10.0kb upstream 10.0kb upstream 14044 true Chr10: 40156791-40170834 Glycine max
Glyma.10G167200 10.0kb upstream 10.0kb upstream 10000 false Chr10: 40160835-40170834 Glycine max
Glyma.10G167200 10.0kb downstream 10.0kb downstream 14044 true Chr10: 40146791-40160834 Glycine max
Glyma.10G167200 10.0kb downstream 10.0kb downstream 10000 false Chr10: 40146791-40156790 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299773 5265 Fabidae View MSA
124072534 5270 Rosid View MSA
123745301 5271 Pentapetalae View MSA
122795426 5272 Eudicot View MSA
122042044 5273 Angiosperm View MSA
121347914 5274 Embryophyte View MSA
123424588 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.84268 0.0 11.4402   Low
cufflinks 6.54461 0.0 18.292    
cufflinks 4.77054 0.0 13.7867    
cufflinks 6.73217 0.0 18.748    
cufflinks 5.81326 0.0 16.4326    
cufflinks 9.35458 0.0 25.3928   High
cufflinks 5.5324 0.0 15.7643    
cufflinks 7.29801 0.0 20.1707    
cufflinks 7.89606 0.0 21.6931    
cufflinks 2.797        
cufflinks 0.297       Low
cufflinks 3.461        
cufflinks 4.513        
cufflinks 4.17        
cufflinks 0.588       Low
cufflinks 2.397        
cufflinks 2.245        
cufflinks 4.976       High
cufflinks 4.684        
cufflinks 2.502        
cufflinks 0.541       Low
cufflinks 2.96        
cufflinks 3.812        
cufflinks 0.489       Low
cufflinks 2.329        
cufflinks 0.954        

0 Strain