Gene : Glyma.10G167500 G. max Wm82.a2.v1
Defline:  (1 of 1) KOG3409 - Exosomal 3'-5' exoribonuclease complex, subunit ski4 (Csl4) Genomic Order:  1675
Name:  ? Glyma.10G167500 Secondary Identifier:  ? PAC:30473952
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G167500 0.5kb upstream 0.5kb upstream 3145 true Chr10: 40182608-40185752 Glycine max
Glyma.10G167500 0.5kb upstream 0.5kb upstream 500 false Chr10: 40182608-40183107 Glycine max
Glyma.10G167500 0.5kb downstream 0.5kb downstream 3145 true Chr10: 40183108-40186252 Glycine max
Glyma.10G167500 0.5kb downstream 0.5kb downstream 500 false Chr10: 40185753-40186252 Glycine max
Glyma.10G167500 1.0kb upstream 1.0kb upstream 3645 true Chr10: 40182108-40185752 Glycine max
Glyma.10G167500 1.0kb upstream 1.0kb upstream 1000 false Chr10: 40182108-40183107 Glycine max
Glyma.10G167500 1.0kb downstream 1.0kb downstream 3645 true Chr10: 40183108-40186752 Glycine max
Glyma.10G167500 1.0kb downstream 1.0kb downstream 1000 false Chr10: 40185753-40186752 Glycine max
Glyma.10G167500 2.0kb upstream 2.0kb upstream 4645 true Chr10: 40181108-40185752 Glycine max
Glyma.10G167500 2.0kb upstream 2.0kb upstream 2000 false Chr10: 40181108-40183107 Glycine max
Glyma.10G167500 2.0kb downstream 2.0kb downstream 4645 true Chr10: 40183108-40187752 Glycine max
Glyma.10G167500 2.0kb downstream 2.0kb downstream 2000 false Chr10: 40185753-40187752 Glycine max
Glyma.10G167500 5.0kb upstream 5.0kb upstream 7645 true Chr10: 40178108-40185752 Glycine max
Glyma.10G167500 5.0kb upstream 5.0kb upstream 5000 false Chr10: 40178108-40183107 Glycine max
Glyma.10G167500 5.0kb downstream 5.0kb downstream 7645 true Chr10: 40183108-40190752 Glycine max
Glyma.10G167500 5.0kb downstream 5.0kb downstream 5000 false Chr10: 40185753-40190752 Glycine max
Glyma.10G167500 10.0kb upstream 10.0kb upstream 12645 true Chr10: 40173108-40185752 Glycine max
Glyma.10G167500 10.0kb upstream 10.0kb upstream 10000 false Chr10: 40173108-40183107 Glycine max
Glyma.10G167500 10.0kb downstream 10.0kb downstream 12645 true Chr10: 40183108-40195752 Glycine max
Glyma.10G167500 10.0kb downstream 10.0kb downstream 10000 false Chr10: 40185753-40195752 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026382 5273 Angiosperm View MSA
122308386 5265 Fabidae View MSA
124065404 5270 Rosid View MSA
123740453 5271 Pentapetalae View MSA
122786772 5272 Eudicot View MSA
121347552 5274 Embryophyte View MSA
123423947 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.6929 0.0 43.2669    
cufflinks 17.6597 0.0 48.2777    
cufflinks 7.3201 0.0 22.0147   Low
cufflinks 11.6549 0.0 33.065    
cufflinks 29.0304 0.0 77.5599 High High
cufflinks 23.4609 0.0 63.07 High  
cufflinks 18.5445 0.0 50.4869    
cufflinks 11.9096 0.0 33.6667    
cufflinks 21.4129 0.0 57.8054 High  
cufflinks 3.529        
cufflinks 2.027       Low
cufflinks 3.857        
cufflinks 10.855     High High
cufflinks 18.325     High High
cufflinks 1.911       Low
cufflinks 4.583        
cufflinks 3.092        
cufflinks 4.28        
cufflinks 5.808        
cufflinks 3.889        
cufflinks 3.059        
cufflinks 4.377        
cufflinks 5.399        
cufflinks 2.725        
cufflinks 4.261        
cufflinks 3.648        

0 Strain