Gene : Glyma.10G171500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR15608 - SPLICING FACTOR U2AF-ASSOCIATED PROTEIN 2 Genomic Order:  1715
Name:  ? Glyma.10G171500 Secondary Identifier:  ? PAC:30475433
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G171500 0.5kb upstream 0.5kb upstream 15655 true Chr10: 40502002-40517656 Glycine max
Glyma.10G171500 0.5kb upstream 0.5kb upstream 500 false Chr10: 40502002-40502501 Glycine max
Glyma.10G171500 0.5kb downstream 0.5kb downstream 15655 true Chr10: 40502502-40518156 Glycine max
Glyma.10G171500 0.5kb downstream 0.5kb downstream 500 false Chr10: 40517657-40518156 Glycine max
Glyma.10G171500 1.0kb upstream 1.0kb upstream 16155 true Chr10: 40501502-40517656 Glycine max
Glyma.10G171500 1.0kb upstream 1.0kb upstream 1000 false Chr10: 40501502-40502501 Glycine max
Glyma.10G171500 1.0kb downstream 1.0kb downstream 16155 true Chr10: 40502502-40518656 Glycine max
Glyma.10G171500 1.0kb downstream 1.0kb downstream 1000 false Chr10: 40517657-40518656 Glycine max
Glyma.10G171500 2.0kb upstream 2.0kb upstream 17155 true Chr10: 40500502-40517656 Glycine max
Glyma.10G171500 2.0kb upstream 2.0kb upstream 2000 false Chr10: 40500502-40502501 Glycine max
Glyma.10G171500 2.0kb downstream 2.0kb downstream 17155 true Chr10: 40502502-40519656 Glycine max
Glyma.10G171500 2.0kb downstream 2.0kb downstream 2000 false Chr10: 40517657-40519656 Glycine max
Glyma.10G171500 5.0kb upstream 5.0kb upstream 20155 true Chr10: 40497502-40517656 Glycine max
Glyma.10G171500 5.0kb upstream 5.0kb upstream 5000 false Chr10: 40497502-40502501 Glycine max
Glyma.10G171500 5.0kb downstream 5.0kb downstream 20155 true Chr10: 40502502-40522656 Glycine max
Glyma.10G171500 5.0kb downstream 5.0kb downstream 5000 false Chr10: 40517657-40522656 Glycine max
Glyma.10G171500 10.0kb upstream 10.0kb upstream 25155 true Chr10: 40492502-40517656 Glycine max
Glyma.10G171500 10.0kb upstream 10.0kb upstream 10000 false Chr10: 40492502-40502501 Glycine max
Glyma.10G171500 10.0kb downstream 10.0kb downstream 25155 true Chr10: 40502502-40527656 Glycine max
Glyma.10G171500 10.0kb downstream 10.0kb downstream 10000 false Chr10: 40517657-40527656 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299213 5265 Fabidae View MSA
124064706 5270 Rosid View MSA
123741272 5271 Pentapetalae View MSA
122787667 5272 Eudicot View MSA
122045065 5273 Angiosperm View MSA
121347459 5274 Embryophyte View MSA
123427935 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.68579 0.0 13.1254    
cufflinks 5.9537 0.0 16.3456    
cufflinks 3.45611 0.0 9.98987   Low
cufflinks 6.06787 0.0 16.6107    
cufflinks 5.29719 0.0 14.6819    
cufflinks 4.0251 0.0 11.4559   Low
cufflinks 8.09336 0.0 21.8218   High
cufflinks 5.81484 0.0 15.9785    
cufflinks 5.88444 0.0 16.1701    
cufflinks 0.681        
cufflinks 0.355       Low
cufflinks 0.947       High
cufflinks 0.981       High
cufflinks 1.154       High
cufflinks 0.529        
cufflinks 0.594        
cufflinks 0.761        
cufflinks 0.965       High
cufflinks 0.971       High
cufflinks 0.459        
cufflinks 0.37       Low
cufflinks 0.608        
cufflinks 0.78        
cufflinks 0.413       Low
cufflinks 0.489        
cufflinks 0.645        

0 Strain